Aniseed - Transcript Card

Transcript 'Cisavi.CG.ENS81.R16....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R16.1224475-1229413.11937.t

Possible name(s)

LRIG1; MALT1; SIGLEC1

Gene model

Cisavi.CG.ENS81.R16.1224475-1229413

Location

R16 [1,224,474 / 1,229,413]

Sequences

Amino acid sequence

Length: 284

>Cisavi.CG.ENS81.R16.1224475-1229413.11937.p
MLSNNLSSNAIRLSDVPPEILTRLGSYLNNEGHNGWNAIVTLLQRSEALSTDEVASFMEN
PACANSPVLSYLKSSQQTVDYLLSCLRLHQCTSAANSFTKDINRWISETVQPQSFVAPAP
PHDPTHYPQMSRQNSFAGGSHSFHSPQQSTMSFTNNLNNPSMPCIPIKCQPKPQTVSAGE
ELMLNCKADMDPSQVQYQWFKGNQPLLEERNHVLMISDVKLQQQGYYHCCVFSQTNTSFV
NRSDEVFVTVVPANVPTSLHASQFTATDKVALLISNEYYENPNH

Nucleotide sequence

Length: 877

>Cisavi.CG.ENS81.R16.1224475-1229413.11937.t
CCATTGCCTGTTTGTAGATATAGGAATGCTATCTAACAATTTGTCTTCAAATGCAATAAG
GTTGTCTGATGTGCCACCTGAAATTCTAACCCGCCTTGGTTCCTATCTTAACAATGAAGG
CCACAATGGATGGAATGCCATTGTTACCCTTTTGCAACGGTCTGAAGCACTAAGTACCGA
TGAAGTAGCCAGTTTCATGGAGAATCCAGCCTGTGCCAATTCCCCTGTACTATCTTATTT
AAAAAGCAGTCAACAAACAGTTGATTATTTACTGTCTTGTCTCCGCCTACATCAATGTAC
CTCTGCTGCCAATAGTTTCACAAAAGACATCAATAGATGGATTTCCGAAACAGTTCAACC
TCAATCTTTTGTTGCACCAGCACCACCACATGACCCAACGCATTATCCGCAAATGAGCCG
TCAGAATTCGTTCGCTGGTGGCTCCCATTCATTTCATTCTCCACAACAATCAACGATGTC
ATTCACCAACAACCTGAACAACCCATCCATGCCTTGCATCCCTATTAAGTGCCAACCGAA
GCCACAAACGGTGTCGGCTGGGGAGGAATTGATGCTGAATTGTAAAGCCGACATGGACCC
CTCGCAAGTACAATACCAGTGGTTCAAGGGAAATCAGCCACTTTTAGAAGAACGTAATCA
TGTGTTGATGATCTCTGATGTGAAGTTACAACAGCAGGGTTACTACCATTGTTGTGTGTT
CTCCCAAACAAATACGAGTTTCGTAAATCGTTCTGATGAAGTTTTTGTCACCGTAGTTCC
AGCCAATGTTCCTACCAGCCTTCACGCCTCCCAGTTTACAGCTACCGATAAAGTCGCACT
TTTAATATCAAACGAATACTACGAAAACCCCAACCAC

InterProScan

ProSiteProfiles	Ig-like_dom (IPR007110) - T[160-247] 11.188
Gene3D	Ig-like_fold (IPR013783) - T[164-250] 1.2E-14
SUPERFAMILY	Ig-like_dom_sf (IPR036179) - T[165-235] 7.86E-14
Pfam	Ig-like_dom (IPR007110) - T[168-246] 9.6E-13
SMART	Ig_sub (IPR003599) - T[171-251] 1.4E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value