- Transcript 'KH2012:KH.L96.81.v1....' >
- Transcript 'Moocul.CG.ELv1_2.S93...' >
- Clone 'cien144389' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.1473434-1481523.12528.t
Possible name(s)
RPS27A; UBB; UBC
Gene model
Location
R16 [1,473,433 / 1,481,510]
Amino acid sequence
Length: 381
>Cisavi.CG.ENS81.R16.1473434-1481523.12528.p
MQIFVKTLTGKTITLEVEASDSIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKTKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKS
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEASDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEASDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGN
Nucleotide sequence
Length: 1,699
>Cisavi.CG.ENS81.R16.1473434-1481523.12528.t
TTTTCGTGAAAACCTTGACTGGAAAGACCATCACCCTAGAGGTTGAGGCATCAGACTCCA
TCGACAATGTTAAGTCAAAGATCCAAGACAAAGAAGGAATCCCTCCGGATCAGCAACGTC
TTATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACATTGAGCGACTACAACATCCAGA
AAGAGTCCACTCTTCACTTGGTCCTTCGTCTTAGAGGAGGAATGCAAATCTTCGTCAAAA
CCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGGCATCTGACTCCATCGACAATGTTA
AGACAAAGATCCAAGACAAAGAAGGAATCCCTCCCGATCAGCAACGTCTCATCTTCGCTG
GAAAACAACTTGAAGATGGCCGCACATTGAGCGACTACAACATCCAGAAAGAGTCCACTC
TTCACTTGGTACTTCGTCTTAGAGGAGGAATGCAAATCTTCGTCAAAACCTTGACTGGAA
AGACCATCACCCTTGAGGTTGAGGCATCCGACTCCATCGACAATGTTAAGACAAAGATCC
AAGACAAAGAAGGAATTCCTCCGGATCAGCAACGTCTCATCTTCGCTGGAAAACAACTTG
AAGATGGCCGCACATTGAGCGACTACAACATCCAGAAAGAGTCCACTCTTCACTTGGTCC
TTCGTCTTAGAGGAGGAATGCAAATCTTCGTCAAAACCTTGACTGGAAAGACCATCACCC
TTGAGGTTGAGGCATCTGACTCCATCGACAATGTTAAGTCAAAGATCCAAGACAAAGAAG
GAATCCCTCCCGATCAGCAACGTCTCATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCA
CATTGAGCGACTACAACATCCAGAAAGAGTCCACTCTTCACTTGGTCCTTCGTCTTAGAG
GAGGAATGCAAATCTTCGTCAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGG
CATCCGACTCCATCGACAATGTTAAGTCAAAGATCCAAGACAAAGAAGGAATCCCTCCCG
ATCAGCAACGTCTCATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACATTGAGCGACT
ACAACATCCAGAAAGAGTCCACTCTTCACTTGGTCCTTCGTCTTAGAGGAGGAATGCAAA
TCTTCGTCAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGGCATCCGACTCTA
TCGACAATGTTAAGTCAAAGATCCAAGACAAAGAAGGAATCCCTCCGGATCAGCAACGTC
TCATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACATTGAGCGACTACAACATCCAGA
AAGAGTCCACTCTTCACTTGGTCCTTCGTCTTAGAGGAGGAAACTAAAACTGCAAACAAC
CTTGCAACTGTCTATATTATATTAACACTGCTTAAATAAAAATAAAATTAGTATATGTAA
AGTTAATAGTCTCTTGTAGTTATGGTGAAAAACTAACGTTCGTAAACATTTTTTAGTAGT
TTTTCTTGCCAACTGCAGAAGGATTTTAATCACTGCATGGTGTTAAAATATGAACTTTTA
AATTAAATAAAATTTGTCCAAAAATTGTTAGTTATTGTTTTTCATTGTAAACCAGCATTA
TAAGTCAAGTCGAGTCTTTGCCCGTTAAAATTGGTACGGTCGTTTGGTCTAGCGGTTAAG
TGCGTCGCCTTTCAATCGA
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[1-76] 30.125 - T[77-152] 30.125 - T[153-228] 30.169 - T[229-304] 30.169 - T[305-380] 30.169 |
| SMART |
Ubiquitin_dom (IPR000626) - T[1-72] 5.4E-34 - T[77-148] 5.4E-34 - T[153-224] 4.9E-34 - T[229-300] 4.9E-34 - T[305-376] 4.9E-34 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[1-76] 1.42E-32 - T[76-152] 4.23E-33 - T[151-228] 3.6E-33 - T[228-304] 4.86E-33 - T[304-380] 4.23E-33 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[3-74] 5.9E-32 - T[79-150] 5.9E-32 - T[155-226] 4.2E-32 - T[231-302] 4.2E-32 - T[307-378] 4.2E-32 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[27-52] . - T[103-128] . - T[179-204] . - T[255-280] . - T[331-356] . |
| PRINTS |
Ubiquitin (IPR019956) - T[163-183] 4.7E-37 - T[184-204] 4.7E-37 - T[205-226] 4.7E-37 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 93.506 % | 150 | 6.13E-45 |
| UBB_HUMAN | 94.737 % | 435 | 6.84E-155 |
| UBC_HUMAN | 94.737 % | 719 | 0 |