- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.1473434-1481523.12529.t
Possible name(s)
RPS27A; UBB; UBC
Gene model
Location
R16 [1,473,433 / 1,480,105]
Amino acid sequence
Length: 305
>Cisavi.CG.ENS81.R16.1473434-1481523.12529.p
MQIFVKTLTGKTITLEVEASDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKSKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKS
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEASDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGN
Nucleotide sequence
Length: 1,377
>Cisavi.CG.ENS81.R16.1473434-1481523.12529.t
AGGAATCCCTCCCGATCAGCAACGTCTCATCTTTGCTGGAAAACAACTTGAAGATGGCCG
CACATTGAGCGACTACAACATTCAAAAAGAGTCCACTCTTCACTTGGTCCTTCGTCTTAG
AGGAGGAATGCAAATCTTCGTCAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGA
GGCATCCGACTCCATCGACAATGTTAAGTCAAAGATCCAAGACAAAGAAGGAATTCCTCC
GGATCAGCAACGTCTCATCTTCGCTGGAAAACAACTTGAAGATGGCCGCACATTGAGCGA
CTACAACATCCAGAAAGAGTCCACTCTTCACTTGGTCCTTCGTCTTAGAGGAGGAATGCA
AATCTTCGTCAAAACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGGCATCTGACTC
CATCGACAATGTTAAGTCAAAGATCCAAGACAAAGAAGGAATCCCTCCCGATCAGCAACG
TCTCATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACATTGAGCGACTACAACATCCA
GAAAGAGTCCACTCTTCACTTGGTCCTTCGTCTTAGAGGAGGAATGCAAATCTTCGTCAA
AACCTTGACTGGAAAGACCATCACCCTTGAGGTTGAGGCATCCGACTCCATCGACAATGT
TAAGTCAAAGATCCAAGACAAAGAAGGAATCCCTCCTGATCAGCAACGTCTCATCTTTGC
TGGAAAACAACTTGAAGATGGCCGCACATTGAGCGACTACAACATCCAGAAAGAGTCCAC
TCTTCACTTGGTCCTTCGTCTTAGAGGAGGAATGCAAATCTTCGTCAAAACCTTGACTGG
AAAGACCATCACCCTAGAGGTTGAAGCATCCGACTCCATCGACAATGTTAAGTCAAAGAT
CCAAGACAAAGAAGGAATCCCTCCGGATCAGCAACGTCTCATCTTTGCTGGAAAACAGCT
TGAAGATGGCCGCACATTGAGCGACTACAACATCCAGAAAGAGTCCACTCTTCACTTGGT
CCTTCGTCTTAGAGGAGGAAACTAAAACTGCAAACAACCTTGCAACTGTCTATATTATAT
TAACACTGCTTAAATAAAAATAAAATTAGTATATGTAAAGTTAATAGTCTCTTGTAGTTA
TGGTGAAAAACTAACGTTCGTAAACATTTTTTAGTAGTTTTTCTTGCCAACTGCAGAAGG
ATTTTAATCACTGCATGGTGTTAAAATATGAACTTTTAAATTAAATAAAATTTGTCCAAA
AATTGTTAGTTATTGTTTTTCATTGTAAACCAGCATTATAAGTCAAGTCGAGTCTTTGCC
CGTTAAAATTGGTACGGTCGTTTGGTCTAGCGGTTAAGTGCGTCGCCTTTCAATCGA
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[1-76] 30.169 - T[77-152] 30.169 - T[153-228] 30.169 - T[229-304] 30.169 |
| SMART |
Ubiquitin_dom (IPR000626) - T[1-72] 4.9E-34 - T[77-148] 4.9E-34 - T[153-224] 4.9E-34 - T[229-300] 4.9E-34 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[1-76] 1.1E-32 - T[76-152] 4.44E-33 - T[152-228] 3.17E-33 - T[228-304] 4.02E-33 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[3-74] 2.9E-32 - T[79-150] 2.9E-32 - T[155-226] 2.9E-32 - T[231-302] 2.9E-32 |
| PRINTS |
Ubiquitin (IPR019956) - T[11-31] 2.7E-37 - T[32-52] 2.7E-37 - T[53-74] 2.7E-37 |
| ProSitePatterns |
Ubiquitin_CS (IPR019954) - T[27-52] . - T[103-128] . - T[179-204] . - T[255-280] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL40_HUMAN | 93.506 % | 150 | 8.79E-46 |
| UBB_HUMAN | 94.323 % | 435 | 3.0E-156 |
| UBC_HUMAN | 94.737 % | 578 | 0 |