- Transcript 'Boschl.CG.Botznik201...' >
- Clone 'ma321p03' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.1828743-1838667.14650.t
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
R16 [1,828,742 / 1,838,667]
Amino acid sequence
Length: 375
>Cisavi.CG.ENS81.R16.1828743-1838667.14650.p
MDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSY
ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGSTMFPGISDRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,685
>Cisavi.CG.ENS81.R16.1828743-1838667.14650.t
CAGGTACAAATTAAGCTAGAAGCTTCTTTAAATTTTACTTAAATCACCAACACTATAAAT
CAACATGGACGATGATGTTGCCGCACTCGTAGTCGACAATGGATCCGGTATGTGCAAAGC
CGGTTTCGCCGGAGATGACGCACCACGTGCCGTCTTTCCATCCATCGTAGGACGACCCCG
TCACCAGGGCGTTATGGTCGGTATGGGCCAAAAAGACAGCTATGTAGGTGATGAAGCCCA
GAGCAAGAGAGGTATTCTTACTCTTAAATACCCAATTGAACACGGTATCGTAACCAACTG
GGACGATATGGAAAAGATCTGGCATCACACCTTCTACAATGAACTCCGTGTCGCCCCAGA
AGAGCACCCCGTTCTTCTCACCGAAGCCCCACTTAACCCCAAGGCTAACCGTGAAAAGAT
GACCCAAATCATGTTCGAGACTTTCAACACCCCAGCCATGTACGTCGCAATCCAAGCCGT
GCTTTCCCTGTACGCCTCTGGTCGCACCACCGGTATCGTCTTCGACAGTGGTGATGGTGT
ATCCCACACTGTCCCCATCTACGAAGGTTACGCCCTTCCCCACGCCATCCTTCGTCTTGA
TTTGGCTGGCCGAGATCTTACCGATTACATGATGAAGATCTTGACCGAGAGGGGTTATTC
ATTCACCACCACTGCCGAGCGTGAAATCGTGCGTGACATCAAAGAGAAGCTTTGTTACGT
TGCTCTCGATTTCGAGCAAGAAATGAGCACCGCTGCCAGCAGCAGCTCCCTTGAGAAGAG
CTACGAACTTCCTGACGGACAGGTCATCACCGTCGGAAACGAACGATTCCGTTGCCCAGA
GGCCCTTTTCCAACCATCCTTCCTTGGTATGGAATCCGCTGGAATCCACGAGACTACTTA
CAACTCCATCATGAAGTGCGATGTTGATATCCGTAAAGATTTGTACGCCAACACCGTGCT
TTCCGGAGGTTCCACTATGTTCCCTGGTATTTCCGACAGAATGCAAAAGGAAATTACCGC
CCTTGCTCCACCAACCATGAAGATCAAGATCATCGCCCCACCAGAGAGGAAATACTCCGT
CTGGATTGGAGGATCCATTCTCGCTTCACTCTCCACCTTCCAACAGATGTGGATCAGCAA
ACAAGAATACGACGAGTCCGGCCCATCTATTGTTCACCGCAAATGCTTCTAATTGCAATA
ATCATAACCTTACCCCGAACTTTTAAAACTATATCGATTTGTTGTTGTGTAAAAACGTTT
ACATATATTTGGGTTTATTTTTGTTCGAAGTATGTTGCTGCGAGCTGTCAAAGGCCGCCA
AGTATCTAATTAACATCACATTCCCATGCAGGCTAATGCTGCTAAACAAACAGTTGAAGG
TACTGTTTATTGTTAACGCAGCCGCCATCATTCCAATCTGAATTAAGGACCAACGCACCG
GCCATTCCTTTTGTAACCGCGTACCTTGTTCTTTTGTTGTAATCAACACTGTTCGAAAAA
TTTTTCAAGTAACAATAAAAAAATACTCGGAAATAACTAAATCAAATTATGCATGGTCTA
GCTTTATATCTAGTGCTTTATAAACGAATACTTGGTGATTTTGCCAAACCTTCACGCGCA
GTGTTGGAATCAATACAATTCCGTTTTTCTGTTATTGGCTGAATCTGCTGTTTTTAAATC
TTTAG
| PANTHER |
Actin (IPR004000) - T[1-374] 4.2E-272 |
| Pfam |
Actin (IPR004000) - T[3-375] 2.8E-151 |
| SMART |
Actin (IPR004000) - T[5-375] 4.2E-241 |
| PRINTS |
Actin (IPR004000) - T[26-35] 1.8E-57 - T[49-60] 1.8E-57 - T[61-83] 1.8E-57 - T[115-128] 1.8E-57 - T[140-159] 1.8E-57 - T[236-252] 1.8E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[53-63] . - T[356-364] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[104-116] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 95.733 % | 763 | 0 |
| ACTB_HUMAN | 96.8 % | 768 | 0 |
| ACTA_HUMAN | 92.513 % | 741 | 0 |