- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.1828743-1838667.14651.t
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
R16 [1,828,742 / 1,830,983]
Amino acid sequence
Length: 285
>Cisavi.CG.ENS81.R16.1828743-1838667.14651.p
MDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSY
DSTLGHHRRKRTIPLPRGPFPTILPWYGIRWNPRDYLQLHHEVRC
Nucleotide sequence
Length: 1,758
>Cisavi.CG.ENS81.R16.1828743-1838667.14651.t
CAGGTACAAATTAAGCTAGAAGCTTCTTTAAATTTTACTTAAATCACCAACACTATAAAT
CAACATGGACGATGATGTTGCCGCACTCGTAGTCGACAATGGATCCGGTATGTGCAAAGC
CGGTTTCGCCGGAGATGACGCACCACGTGCCGTCTTTCCATCCATCGTAGGACGACCCCG
TCACCAGGGCGTTATGGTCGGTATGGGCCAAAAAGACAGCTATGTAGGTGATGAAGCCCA
GAGCAAGAGAGGTATTCTTACTCTTAAATACCCAATTGAACACGGTATCGTAACCAACTG
GGACGATATGGAAAAGATCTGGCATCACACCTTCTACAATGAACTCCGTGTCGCCCCAGA
AGAGCACCCCGTTCTTCTCACCGAAGCCCCACTTAACCCCAAGGCTAACCGTGAAAAGAT
GACCCAAATCATGTTCGAGACTTTCAACACCCCAGCCATGTACGTCGCAATCCAAGCCGT
GCTTTCCCTGTACGCCTCTGGTCGCACCACCGGTATCGTCTTCGACAGTGGTGATGGTGT
ATCCCACACTGTCCCCATCTACGAAGGTTACGCCCTTCCCCACGCCATCCTTCGTCTTGA
TTTGGCTGGCCGAGATCTTACCGATTACATGATGAAGATCTTGACCGAGAGGGGTTATTC
ATTCACCACCACTGCCGAGCGTGAAATCGTGCGTGACATCAAAGAGAAGCTTTGTTACGT
TGCTCTCGATTTCGAGCAAGAAATGAGCACCGCTGCCAGCAGCAGCTCCCTTGAGAAGAG
CTACGATTCAACATTAGGTCATCACCGTCGGAAACGAACGATTCCGTTGCCCAGAGGCCC
TTTTCCAACCATCCTTCCTTGGTATGGAATCCGCTGGAATCCACGAGACTACTTACAACT
CCATCATGAAGTGCGATGTTGATATCCGTAAAGATTTGTACGCCAACACCGTGCTTTCCG
GAGGTTCCACTATGTTCCCTGGTATTTCCGACAGAATGCAAAAGGAAATTACCGCCCTTG
CTCCACCAACCATGAAGATCAAGATCATCGCCCCACCAGAGAGGAAATACTCCGTCTGGA
TTGGAGGATCCATTCTCGCTTCACTCTCCACCTTCCAACAGATGTGGATCAGCAAACAAG
AATACGACGAGTCCGGCCCATCTATTGTTCACCGCAAATGCTTCTAATTGCAATAATCAT
AACCTTACCCCGAACTTTTAAAACTATATCGATTTGTTGTTGTGTAAAAACGTTTACATA
TATTTGGGTTTATTTTTGTTCGAAGTATGTTGCTGCGAGCTGTCAAAGGCCGCCAAGTAT
CTAATTAACATCACATTCCCATGCAGGCTAATGCTGCTAAACAAACAGTTGAAGGTACTG
TTTATTGTTAACGCAGCCGCCATCATTCCAATCTGAATTAAGGACCAAAGCACCGGCCAT
TCCTTTTGTAACCGCGTACCTTGTTCTTTTGTTGTAATCAACACTGTTCGAAAAATTTTT
CAAGTAACAATAAAAAAATACTCGGAAATAACTAAATCAAATTATGCATGGTCTAGCTTT
ATATCTAGTGCTTTATAAACGAATACTTGGTGATTTTGCCAAACCTTCACGCGCAGTGTT
GGAATCAATACAATTCCGTTTTTCTGTTACTGGCTGAATCTGCTGTTTTTAAATCTTTAG
ATCCAGTTCTAGCATTTATAATGCTTTCGCTGCGATTAGACCGATAGTACTGGTACCTGT
TCTTAGCAACAGTATAAC
| PANTHER |
Actin (IPR004000) - T[1-242] 3.7E-172 |
| Pfam |
Actin (IPR004000) - T[3-240] 4.0E-83 |
| SMART |
Actin (IPR004000) - T[5-284] 2.0E-99 |
| PRINTS |
Actin (IPR004000) - T[26-35] 1.2E-46 - T[49-60] 1.2E-46 - T[61-83] 1.2E-46 - T[115-128] 1.2E-46 - T[140-159] 1.2E-46 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[53-63] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[104-116] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 95.851 % | 486 | 1.21E-174 |
| ACTB_HUMAN | 97.51 % | 491 | 1.55E-176 |
| ACTA_HUMAN | 88.538 % | 468 | 1.75E-167 |