- Transcript 'Harore.CG.MTP2014.S3...' >
- Clone 'AHC0AAA187YA10' >
- Transcript 'KH2012:KH.C5.126.v1....' >
- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.2085720-2098955.15884.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
R16 [2,085,719 / 2,098,821]
Amino acid sequence
Length: 727
>Cisavi.CG.ENS81.R16.2085720-2098955.15884.p
GETKSPYSMPGILHFIQHEWSRFEMERAQWDVEKAELQARIAFLQGERKGQENLKRDLIR
RIKMLEFALKQERAKVHKLKFGTDLSVEQKHNESNDESKTNELQTTNAHMSWRHGRQLLR
QYLQEVGYSETILDVRSQRVRALLGNNYDAPKPVENDNQVVNGNISDEEKQSNTDGNTES
IFKDFNFLNAEDNDNEDDEDVNMQDEDVTDDGDHQRKARAKDAFDEVDGFGDEEMALAEF
DFLNPTAAEPGILLSMTDDMKLDWSVDQNKLNAMKEQFRQEKRQTKKKELKRNAVLSFHN
FYKVLRKKTMNGSLTCFTGPIKKDLQSMLDTLRGSEMSRATEEVDIHIPDEESLPFTVGG
THMGDESIENALGLGALAGLTVANEADPLSYDIAATKESYRKTWNPKYTLRSHFDGIRAI
RFLPNESAVITASEDHTMKLWNLNKPLPSKKTQSLDVEPIYSFRGHSGAVLSLEVDADGS
YCFSGGLDASVRVWSIPSVEIDAYDTYDPAVIQKVLVGHTDAVWSLSYSSTRQQLLSASS
DCSVRLWNPTSNDPLIQTYTTEGIPTSVCFVQCDSNHAVVSHTDGKINLYDLETGQISLV
LAEGDGSKYIDCSVNCVASHPTMPITMTAHDDKHIKFFDNSSGKLIHSMVAHLDSVTSLS
VDPNGLYLLSGSHDCSIRLWNLDSKTCIQELTSHRKKFDESIYSVAFHPSATYIASAGAD
ALAKIFV
Nucleotide sequence
Length: 2,312
>Cisavi.CG.ENS81.R16.2085720-2098955.15884.t
AACGTTAGATAAATTCAAATATATGCTCATTTGTTAGTGAATATTGACCACTGTATTTCT
TACACGTTGTTTCAATGATGGATTTAGAAAATGGCGATGCTGGTGGGAACAACCAAGCAA
ATGAACCTGGAGAGACGAAATCCCCGTATTCAATGCCAGGAATTCTTCACTTCATCCAGC
ATGAATGGTCGAGGTTCGAGATGGAACGTGCTCAGTGGGATGTTGAGAAAGCTGAGTTAC
AGGCAAGAATTGCATTTCTACAGGGAGAGCGAAAAGGCCAAGAAAATTTAAAACGAGACT
TAATACGAAGAATAAAGATGCTGGAATTTGCTTTGAAGCAAGAAAGAGCAAAAGTCCACA
AGTTAAAATTCGGAACAGATTTAAGCGTCGAACAAAAGCACAATGAATCAAATGATGAGT
CAAAAACGAATGAACTTCAAACAACCAATGCTCATATGTCATGGCGCCATGGGCGACAAT
TGCTGAGGCAATACCTACAAGAAGTGGGGTATAGTGAAACAATACTCGACGTACGCTCCC
AGCGAGTTCGTGCTCTGCTTGGGAATAATTACGACGCTCCAAAACCAGTGGAAAACGACA
ATCAGGTCGTTAATGGCAACATTTCAGATGAAGAAAAACAATCGAATACGGATGGGAACA
CCGAGAGCATCTTCAAGGACTTCAACTTCCTCAACGCAGAAGACAATGACAACGAAGATG
ACGAGGATGTTAACATGCAGGATGAGGATGTTACTGATGACGGGGATCATCAGAGGAAAG
CCAGAGCAAAGGATGCATTTGATGAGGTGGATGGGTTTGGAGATGAGGAAATGGCTCTTG
CTGAGTTTGATTTCCTTAATCCAACAGCCGCTGAACCTGGTATTCTCCTTTCAATGACAG
ATGATATGAAGCTAGATTGGTCGGTAGACCAGAACAAACTAAACGCCATGAAGGAACAAT
TCCGGCAAGAAAAACGCCAGACAAAGAAGAAAGAATTGAAACGTAATGCAGTTTTGAGTT
TTCATAATTTTTATAAGGTGTTACGTAAAAAGACCATGAATGGTTCACTAACGTGCTTCA
CAGGTCCAATAAAGAAAGATCTGCAGAGCATGTTGGACACACTGAGAGGATCAGAGATGT
CCCGGGCAACAGAGGAGGTCGACATACATATCCCTGATGAAGAATCTCTCCCATTCACGG
TCGGTGGAACTCACATGGGAGATGAATCGATTGAAAACGCTCTCGGACTTGGAGCATTGG
CTGGCCTTACTGTGGCCAATGAAGCCGACCCACTTTCTTACGATATCGCTGCGACAAAGG
AATCATACCGCAAAACCTGGAATCCCAAATACACTCTCCGGAGCCATTTCGACGGGATCC
GAGCGATTAGGTTCCTCCCAAACGAGTCCGCGGTGATCACAGCATCGGAGGATCACACGA
TGAAGCTCTGGAACCTCAACAAGCCGCTTCCGAGCAAGAAGACCCAGTCGCTAGATGTGG
AGCCGATATATAGCTTCAGAGGACACTCTGGTGCAGTTCTCAGTCTTGAAGTGGATGCTG
ATGGCTCGTATTGCTTCAGTGGTGGGTTGGATGCCAGCGTTCGTGTGTGGTCCATACCTA
GTGTGGAAATTGATGCTTACGATACTTATGACCCAGCGGTCATCCAGAAAGTGCTGGTCG
GTCACACAGACGCAGTGTGGTCGCTCTCGTACTCCAGCACTCGTCAACAATTGTTGTCGG
CCTCGTCAGATTGCTCGGTCAGACTGTGGAATCCAACATCAAATGATCCACTTATTCAAA
CCTACACAACCGAAGGAATCCCCACATCAGTGTGCTTCGTCCAGTGTGATTCCAACCACG
CCGTCGTATCCCACACTGATGGGAAGATCAACCTGTACGACCTGGAAACTGGACAAATTT
CCCTCGTGCTTGCTGAAGGAGATGGAAGTAAGTACATTGACTGCAGTGTCAACTGCGTGG
CAAGTCACCCCACGATGCCAATAACCATGACAGCTCATGACGACAAACACATTAAATTCT
TTGACAACTCGTCAGGCAAATTGATCCATTCTATGGTAGCACATCTGGACTCTGTCACCA
GTTTATCTGTTGATCCTAATGGTCTTTACCTGCTTTCTGGAAGCCATGACTGTTCGATCC
GTTTATGGAACCTGGACAGCAAGACTTGTATACAAGAGCTCACTTCGCATAGGAAAAAGT
TTGATGAATCGATTTACTCGGTTGCATTTCACCCCAGCGCCACATACATAGCCAGCGCCG
GTGCCGACGCTTTAGCAAAGATTTTTGTATAG
| Pfam |
Striatin_N (IPR013258) - T[9-133] 1.5E-43 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[391-504] 6.1E-21 - T[505-610] 1.5E-20 - T[611-727] 7.1E-28 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[402-726] 4.66E-68 |
| SMART |
WD40_repeat (IPR001680) - T[403-442] 8.7E-7 - T[456-495] 1.9E-8 - T[509-548] 3.0E-8 - T[552-591] 0.79 - T[594-639] 4.7 - T[642-681] 4.4E-10 - T[684-727] 1.4E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[404-442] 2.1E-4 - T[458-495] 3.5E-5 - T[513-548] 3.7E-5 - T[643-681] 1.7E-8 - T[686-725] 0.0064 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[410-727] 43.608 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[410-444] 13.416 - T[463-496] 13.215 - T[516-557] 13.984 - T[649-690] 15.655 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[429-443] . - T[668-682] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[429-443] 8.2E-6 - T[535-549] 8.2E-6 - T[668-682] 8.2E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 52.261 % | 719 | 0 |
| STRN_HUMAN | 51.203 % | 702 | 0 |
| STRN4_HUMAN | 53.889 % | 409 | 1.39E-132 |