- Transcript 'KH2012:KH.C4.519.v3....' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.2085720-2098955.15888.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
R16 [2,086,220 / 2,098,821]
Amino acid sequence
Length: 683
>Cisavi.CG.ENS81.R16.2085720-2098955.15888.p
KSPYSMPGILHFIQHEWSRFEMERAQWDVEKAELQARIAFLQGERKGQENLKRDLIRRIK
MLEFALKQERAKVHKLKFGTDLSVEQKHNESNGKCDFPSTVSKTNELQTTNAHMSWRHGR
QLLRQYLQEVGYSETILDVRSQRVRALLGNNYDAPKPVENDNQVVNGNISDEEKQSNRCV
WNQLQLASCSLNLTPTLTSIFLPRSAGFVLATHSTDGNTESIFKDFNFLNAEDNDNEDDE
DVNMQDEDVTDDGDHQRKARAKTMNGSLTCFTGPIKKDLQSMLDTLRGSEMSRATEEPYN
LLNVFHSESLPFTVGGTHMGDESIENALGLGALAGLTVANEADPLSYDIAATKESYRKTW
NPKYTLRSHFDGIRAIRFLPNESAVITASEDHTMKLWNLNKPLPSKKTQSLDVEPIYSFR
GHSGAVLSLEVDADGSYCFSGGLDASVRVWSIPSVEIDAYDTYDPAVIQKVLVGHTDAVW
SLSYSSTRQQLLSASSDCSVRLWNPTSNDPLIQTYTTEGIPTSVCFVQCDSNHAVVSHTD
GKINLYDLETGQISLVLAEGDGSKYIDCSVNCVASHPTMPITMTAHDDKHIKFFDNSSGK
LIHSMVAHLDSVTSLSVDPNGLYLLSGSHDCSIRLWNLDSKTCIQELTSHRKKFDESIYS
VAFHPSATYIASAGADALAKIFV
Nucleotide sequence
Length: 2,052
>Cisavi.CG.ENS81.R16.2085720-2098955.15888.t
AAATCCCCGTATTCAATGCCAGGAATTCTTCACTTCATCCAGCATGAATGGTCGAGGTTC
GAGATGGAACGTGCTCAGTGGGATGTTGAGAAAGCTGAGTTACAGGCAAGAATTGCATTT
CTACAGGGAGAGCGAAAAGGCCAAGAAAATTTAAAACGAGACTTAATACGAAGAATAAAG
ATGCTGGAATTTGCTTTGAAGCAAGAAAGAGCAAAAGTCCACAAGTTAAAATTCGGAACA
GATTTAAGCGTCGAACAAAAGCACAATGAATCAAATGGTAAGTGCGATTTTCCTAGCACT
GTTTCAAAAACGAATGAACTTCAAACAACCAATGCTCATATGTCATGGCGCCATGGGCGA
CAATTGCTGAGGCAATACCTACAAGAAGTGGGGTATAGTGAAACAATACTCGACGTACGC
TCCCAGCGAGTTCGTGCTCTGCTTGGGAATAATTACGACGCTCCAAAACCAGTGGAAAAC
GACAATCAGGTCGTTAATGGCAACATTTCAGATGAAGAAAAACAATCGAACAGATGTGTT
TGGAACCAGTTGCAGCTGGCCAGCTGCTCGTTGAATCTTACCCCAACATTAACGTCCATA
TTTCTCCCAAGGTCGGCCGGATTCGTGTTGGCAACCCACAGTACGGATGGGAACACCGAG
AGCATCTTCAAGGACTTCAACTTCCTCAACGCAGAAGACAATGACAACGAAGATGACGAG
GATGTTAACATGCAGGATGAGGATGTTACTGATGACGGGGATCATCAGAGGAAAGCCAGA
GCAAAGACCATGAATGGTTCACTAACGTGCTTCACAGGTCCAATAAAGAAAGATCTGCAG
AGCATGTTGGACACACTGAGAGGATCAGAGATGTCCCGGGCAACAGAGGAGCCATATAAT
CTCCTTAATGTTTTCCATTCAGAATCTCTCCCATTCACGGTCGGTGGAACTCACATGGGA
GATGAATCGATTGAAAACGCTCTCGGACTTGGAGCATTGGCTGGCCTTACTGTGGCCAAT
GAAGCCGACCCACTTTCTTACGATATCGCTGCGACAAAGGAATCATACCGCAAAACCTGG
AATCCCAAATACACTCTCCGGAGCCATTTCGACGGGATCCGAGCGATTAGGTTCCTCCCA
AACGAGTCCGCGGTGATCACAGCATCGGAGGATCACACGATGAAGCTCTGGAACCTCAAC
AAGCCGCTTCCGAGCAAGAAGACCCAGTCGCTAGATGTGGAGCCGATATATAGCTTCAGA
GGACACTCTGGTGCAGTTCTCAGTCTTGAAGTGGATGCTGATGGCTCGTATTGCTTCAGT
GGTGGGTTGGATGCCAGCGTTCGTGTGTGGTCCATACCTAGTGTGGAAATTGATGCTTAC
GATACTTATGACCCAGCGGTCATCCAGAAAGTGCTGGTCGGTCACACAGACGCAGTGTGG
TCGCTCTCGTACTCCAGCACTCGTCAACAATTGTTGTCGGCCTCGTCAGATTGCTCGGTC
AGACTGTGGAATCCAACATCAAATGATCCACTTATTCAAACCTACACAACCGAAGGAATC
CCCACATCAGTGTGCTTCGTCCAGTGTGATTCCAACCACGCCGTCGTATCCCACACTGAT
GGGAAGATCAACCTGTACGACCTGGAAACTGGACAAATTTCCCTCGTGCTTGCTGAAGGA
GATGGAAGTAAGTACATTGACTGCAGTGTCAACTGCGTGGCAAGTCACCCCACGATGCCA
ATAACCATGACAGCTCATGACGACAAACACATTAAATTCTTTGACAACTCGTCAGGCAAA
TTGATCCATTCTATGGTAGCACATCTGGACTCTGTCACCAGTTTATCTGTTGATCCTAAT
GGTCTTTACCTGCTTTCTGGAAGCCATGACTGTTCGATCCGTTTATGGAACCTGGACAGC
AAGACTTGTATACAAGAGCTCACTTCGCATAGGAAAAAGTTTGATGAATCGATTTACTCG
GTTGCATTTCACCCCAGCGCCACATACATAGCCAGCGCCGGTGCCGACGCTTTAGCAAAG
ATTTTTGTATAG
| Pfam |
Striatin_N (IPR013258) - T[6-137] 4.6E-46 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[347-459] 6.2E-21 - T[460-565] 9.3E-21 - T[566-683] 5.5E-28 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[358-682] 4.4E-68 |
| SMART |
WD40_repeat (IPR001680) - T[359-398] 8.7E-7 - T[412-451] 1.9E-8 - T[465-504] 3.0E-8 - T[508-547] 0.79 - T[550-595] 4.7 - T[598-637] 4.4E-10 - T[640-683] 1.4E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[360-398] 2.0E-4 - T[414-451] 3.2E-5 - T[469-504] 3.5E-5 - T[599-637] 1.6E-8 - T[642-681] 0.006 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[366-400] 13.416 - T[419-452] 13.215 - T[472-513] 13.984 - T[605-646] 15.655 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[366-683] 43.608 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[385-399] . - T[624-638] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[385-399] 6.9E-6 - T[491-505] 6.9E-6 - T[624-638] 6.9E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 50.738 % | 677 | 0 |
| STRN_HUMAN | 49.531 % | 669 | 0 |
| STRN4_HUMAN | 44.69 % | 584 | 0 |