- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.2085720-2098955.15889.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
R16 [2,086,220 / 2,098,821]
Amino acid sequence
Length: 645
>Cisavi.CG.ENS81.R16.2085720-2098955.15889.p
KSPYSMPGILHFIQHEWSRFEMERAQWDVEKAELQARIAFLQGERKGQENLKRDLIRRIK
MLEFALKQERAKVHKLKFGTDLSVEQKHNESNGKCDFPSTSKTNELQTTNAHMSWRHGRQ
LLRQYLQEVGYSETILDVRSQRVRALLGNNYDAPKPVENDNQVVNGNISDEEKQSNTDGN
TESIFKDFNFLNAEDNDNEDDEDLDWSVDQNKLNAMKEQFRQEKRQTKKKELKRKGSEMS
RATEEVDIHIPDEGDCYESIENALGLGALAGLTYNQKQQKTSLNTQVLNLQQLIFKIWLS
VTEFSTMDFQIAATKESYRKTWNPKYTLRSHFDGIRAIRFLPNESAVITASEDHTMKLWN
LNKPLPSKKTQSLDVEPIYSFRGHSGAVLSLEVDADGSYCFSGGLDASVRVWSIPSVEID
AYDTYDPAVIQKVLVGHTDAVWSLSYSSTRQQLLSASSDCSVRLWNPTSNDPLIQTYTTE
GIPTSVCFVQCDSNHAVVSHTDGKINLYDLETGQISLVLAEGDGSKYIDCSVNCVASHPT
MPITMTAHDDKHIKFFDNSSGKLIHSMVAHLDSVTSLSVDPNGLYLLSGSHDCSIRLWNL
DSKTCIQELTSHRKKFDESIYSVAFHPSATYIASAGADALAKIFV
Nucleotide sequence
Length: 1,938
>Cisavi.CG.ENS81.R16.2085720-2098955.15889.t
AAATCCCCGTATTCAATGCCAGGAATTCTTCACTTCATCCAGCATGAATGGTCGAGGTTC
GAGATGGAACGTGCTCAGTGGGATGTTGAGAAAGCTGAGTTACAGGCAAGAATTGCATTT
CTACAGGGAGAGCGAAAAGGCCAAGAAAATTTAAAACGAGACTTAATACGAAGAATAAAG
ATGCTGGAATTTGCTTTGAAGCAAGAAAGAGCAAAAGTCCACAAGTTAAAATTCGGAACA
GATTTAAGCGTCGAACAAAAGCACAATGAATCAAATGGTAAGTGCGATTTTCCTAGCACT
TCAAAAACGAATGAACTTCAAACAACCAATGCTCATATGTCATGGCGCCATGGGCGACAA
TTGCTGAGGCAATACCTACAAGAAGTGGGGTATAGTGAAACAATACTCGACGTACGCTCC
CAGCGAGTTCGTGCTCTGCTTGGGAATAATTACGACGCTCCAAAACCAGTGGAAAACGAC
AATCAGGTCGTTAATGGCAACATTTCAGATGAAGAAAAACAATCGAATACGGATGGGAAC
ACCGAGAGCATCTTCAAGGACTTCAACTTCCTCAACGCAGAAGACAATGACAACGAAGAT
GACGAGGATCTAGATTGGTCGGTAGACCAGAACAAACTAAACGCCATGAAGGAACAATTC
CGGCAAGAAAAACGCCAGACAAAGAAGAAAGAATTGAAACGTAAAGGATCAGAGATGTCC
CGGGCAACAGAGGAGGTCGACATACATATCCCTGATGAAGGTGATTGTTATGAATCGATT
GAAAACGCTCTCGGACTTGGAGCATTGGCTGGCCTTACTTATAACCAAAAACAACAAAAA
ACTTCTCTAAACACGCAAGTTCTCAACTTACAACAATTAATTTTTAAAATTTGGTTATCA
GTTACTGAATTCTCAACTATGGATTTCCAGATCGCTGCGACAAAGGAATCATACCGCAAA
ACCTGGAATCCCAAATACACTCTCCGGAGCCATTTCGACGGGATCCGAGCGATTAGGTTC
CTCCCAAACGAGTCCGCGGTGATCACAGCATCGGAGGATCACACGATGAAGCTCTGGAAC
CTCAACAAGCCGCTTCCGAGCAAGAAGACCCAGTCGCTAGATGTGGAGCCGATATATAGC
TTCAGAGGACACTCTGGTGCAGTTCTCAGTCTTGAAGTGGATGCTGATGGCTCGTATTGC
TTCAGTGGTGGGTTGGATGCCAGCGTTCGTGTGTGGTCCATACCTAGTGTGGAAATTGAT
GCTTACGATACTTATGACCCAGCGGTCATCCAGAAAGTGCTGGTCGGTCACACAGACGCA
GTGTGGTCGCTCTCGTACTCCAGCACTCGTCAACAATTGTTGTCGGCCTCGTCAGATTGC
TCGGTCAGACTGTGGAATCCAACATCAAATGATCCACTTATTCAAACCTACACAACCGAA
GGAATCCCCACATCAGTGTGCTTCGTCCAGTGTGATTCCAACCACGCCGTCGTATCCCAC
ACTGATGGGAAGATCAACCTGTACGACCTGGAAACTGGACAAATTTCCCTCGTGCTTGCT
GAAGGAGATGGAAGTAAGTACATTGACTGCAGTGTCAACTGCGTGGCAAGTCACCCCACG
ATGCCAATAACCATGACAGCTCATGACGACAAACACATTAAATTCTTTGACAACTCGTCA
GGCAAATTGATCCATTCTATGGTAGCACATCTGGACTCTGTCACCAGTTTATCTGTTGAT
CCTAATGGTCTTTACCTGCTTTCTGGAAGCCATGACTGTTCGATCCGTTTATGGAACCTG
GACAGCAAGACTTGTATACAAGAGCTCACTTCGCATAGGAAAAAGTTTGATGAATCGATT
TACTCGGTTGCATTTCACCCCAGCGCCACATACATAGCCAGCGCCGGTGCCGACGCTTTA
GCAAAGATTTTTGTATAG
| Pfam |
Striatin_N (IPR013258) - T[6-136] 8.0E-46 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[310-418] 3.4E-20 - T[419-530] 1.2E-20 - T[531-644] 1.6E-27 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[320-644] 3.85E-68 |
| SMART |
WD40_repeat (IPR001680) - T[321-360] 8.7E-7 - T[374-413] 1.9E-8 - T[427-466] 3.0E-8 - T[470-509] 0.79 - T[512-557] 4.7 - T[560-599] 4.4E-10 - T[602-645] 1.4E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[322-360] 1.8E-4 - T[376-413] 3.0E-5 - T[431-466] 3.2E-5 - T[561-599] 1.5E-8 - T[604-643] 0.0055 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[328-645] 43.608 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[328-362] 13.416 - T[381-414] 13.215 - T[434-475] 13.984 - T[567-608] 15.655 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[347-361] . - T[586-600] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[347-361] 5.9E-6 - T[453-467] 5.9E-6 - T[586-600] 5.9E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 49.031 % | 480 | 1.41E-160 |
| STRN_HUMAN | 46.067 % | 456 | 1.58E-151 |
| STRN4_HUMAN | 52.707 % | 399 | 1.14E-129 |