- Transcript 'KH2012:KH.C5.126.v2....' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Clone 'AHC0AAA187YA10' >
- Transcript 'KH2012:KH.C5.126.v1....' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.2085720-2098955.15891.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
R16 [2,086,229 / 2,098,821]
Amino acid sequence
Length: 729
>Cisavi.CG.ENS81.R16.2085720-2098955.15891.p
YSMPGILHFIQHEWSRFEMERAQWDVEKAELQARIAFLQGERKGQENLKRDLIRRIKMLE
FALKQERAKVHKLKFGTDLSVEQKHNESNDESKTNELQTTNAHMSWRHGRQLLRQYLQEV
GYSETILDVRSQRVRALLGNNYDAPKPVENDNQVVNGNISDEEKQSNTDGNTESIFKDFN
FLNAEDNDNEDDEDVNMQDEDVTDDGDHQRKARAKDAFDEVDGFGDEEMALAEFDFLNPT
AAEPGINFTILGKLNFSFQYSSLLSMTDDMKLDWSVDQNKLNAMKEQFRQEKRQTKKKEL
KRKYPLSRPELNTKFGQDFLPKEENTLYIVQEVRSLSMHVPDHPYNLLNVFHSESLPFTV
GGTHMGDESIENALGLGALAGLTVANEADPLSYDIAATKESYRKTWNPKYTLRSHFDGIR
AIRFLPNESAVITASEDHTMKLWNLNKPLPSKKTQSLDVEPIYSFRGHSGAVLSLEVDAD
GSYCFSGGLDASVRVWSIPSVEIDAYDTYGKSVIQKVLVGHTDAVWSLSYSSTRQQLLSA
SSDCSVRLWNPTSNDPLIQTYTTEGIPTSVCFVQCDSNHAVVSHTDGKINLYDLETGQIS
LVLAEGDGSKYIDCSVNCVASHPTMPITMTAHDDKHIKFFDNSSGKLIHSMVAHLDSVTS
LSVDPNGLYLLSGSHDCSIRLWNLDSKTCIQELTSHRKKFDESIYSVAFHPSATYIASAG
ADALAKIFV
Nucleotide sequence
Length: 2,190
>Cisavi.CG.ENS81.R16.2085720-2098955.15891.t
TATTCAATGCCAGGAATTCTTCACTTCATCCAGCATGAATGGTCGAGGTTCGAGATGGAA
CGTGCTCAGTGGGATGTTGAGAAAGCTGAGTTACAGGCAAGAATTGCATTTCTACAGGGA
GAGCGAAAAGGCCAAGAAAATTTAAAACGAGACTTAATACGAAGAATAAAGATGCTGGAA
TTTGCTTTGAAGCAAGAAAGAGCAAAAGTCCACAAGTTAAAATTCGGAACAGATTTAAGC
GTCGAACAAAAGCACAATGAATCAAATGATGAGTCAAAAACGAATGAACTTCAAACAACC
AATGCTCATATGTCATGGCGCCATGGGCGACAATTGCTGAGGCAATACCTACAAGAAGTG
GGGTATAGTGAAACAATACTCGACGTACGCTCCCAGCGAGTTCGTGCTCTGCTTGGGAAT
AATTACGACGCTCCAAAACCAGTGGAAAACGACAATCAGGTCGTTAATGGCAACATTTCA
GATGAAGAAAAACAATCGAATACGGATGGGAACACCGAGAGCATCTTCAAGGACTTCAAC
TTCCTCAACGCAGAAGACAATGACAACGAAGATGACGAGGATGTTAACATGCAGGATGAG
GATGTTACTGATGACGGGGATCATCAGAGGAAAGCCAGAGCAAAGGATGCATTTGATGAG
GTGGATGGGTTTGGAGATGAGGAAATGGCTCTTGCTGAGTTTGATTTCCTTAATCCAACA
GCCGCTGAACCTGGTATTAATTTTACCATTTTGGGAAAATTGAACTTTTCTTTCCAATAC
TCAAGTCTCCTTTCAATGACAGATGATATGAAGCTAGATTGGTCGGTAGACCAGAACAAA
CTAAACGCCATGAAGGAACAATTCCGGCAAGAAAAACGCCAGACAAAGAAGAAAGAATTG
AAACGTAAGTATCCACTTTCTAGACCTGAACTTAACACTAAGTTTGGACAAGATTTTTTA
CCAAAAGAAGAAAACACTTTATATATTGTGCAAGAAGTAAGAAGTCTATCTATGCATGTG
CCAGACCATCCATATAATCTCCTTAATGTTTTCCATTCAGAATCTCTCCCATTCACGGTC
GGTGGAACTCACATGGGAGATGAATCGATTGAAAACGCTCTCGGACTTGGAGCATTGGCT
GGCCTTACTGTGGCCAATGAAGCCGACCCACTTTCTTACGATATCGCTGCGACAAAGGAA
TCATACCGCAAAACCTGGAATCCCAAATACACTCTCCGGAGCCATTTCGACGGGATCCGA
GCGATTAGGTTCCTCCCAAACGAGTCCGCGGTGATCACAGCATCGGAGGATCACACGATG
AAGCTCTGGAACCTCAACAAGCCGCTTCCGAGCAAGAAGACCCAGTCGCTAGATGTGGAG
CCGATATATAGCTTCAGAGGACACTCTGGTGCAGTTCTCAGTCTTGAAGTGGATGCTGAT
GGCTCGTATTGCTTCAGTGGTGGGTTGGATGCCAGCGTTCGTGTGTGGTCCATACCTAGT
GTGGAAATTGATGCTTACGATACTTATGGTAAGTCGGTCATCCAGAAAGTGCTGGTCGGT
CACACAGACGCAGTGTGGTCGCTCTCGTACTCCAGCACTCGTCAACAATTGTTGTCGGCC
TCGTCAGATTGCTCGGTCAGACTGTGGAATCCAACATCAAATGATCCACTTATTCAAACC
TACACAACCGAAGGAATCCCCACATCAGTGTGCTTCGTCCAGTGTGATTCCAACCACGCC
GTCGTATCCCACACTGATGGGAAGATCAACCTGTACGACCTGGAAACTGGACAAATTTCC
CTCGTGCTTGCTGAAGGAGATGGAAGTAAGTACATTGACTGCAGTGTCAACTGCGTGGCA
AGTCACCCCACGATGCCAATAACCATGACAGCTCATGACGACAAACACATTAAATTCTTT
GACAACTCGTCAGGCAAATTGATCCATTCTATGGTAGCACATCTGGACTCTGTCACCAGT
TTATCTGTTGATCCTAATGGTCTTTACCTGCTTTCTGGAAGCCATGACTGTTCGATCCGT
TTATGGAACCTGGACAGCAAGACTTGTATACAAGAGCTCACTTCGCATAGGAAAAAGTTT
GATGAATCGATTTACTCGGTTGCATTTCACCCCAGCGCCACATACATAGCCAGCGCCGGT
GCCGACGCTTTAGCAAAGATTTTTGTATAG
| Pfam |
Striatin_N (IPR013258) - T[3-127] 1.5E-43 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[393-503] 3.1E-20 - T[504-612] 3.6E-20 - T[613-728] 1.9E-27 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[404-728] 6.33E-68 |
| SMART |
WD40_repeat (IPR001680) - T[405-444] 8.7E-7 - T[458-497] 1.9E-8 - T[511-550] 2.9E-8 - T[554-593] 0.79 - T[596-641] 4.7 - T[644-683] 4.4E-10 - T[686-729] 1.4E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[406-444] 2.1E-4 - T[460-497] 3.5E-5 - T[515-550] 3.6E-5 - T[645-683] 1.7E-8 - T[688-727] 0.0064 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[412-729] 43.608 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[412-446] 13.416 - T[465-498] 13.215 - T[518-559] 13.984 - T[651-692] 15.655 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[431-445] . - T[670-684] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[431-445] 8.2E-6 - T[537-551] 8.2E-6 - T[670-684] 8.2E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 52.785 % | 720 | 0 |
| STRN_HUMAN | 50.593 % | 696 | 0 |
| STRN4_HUMAN | 53.611 % | 405 | 8.72E-131 |