- Clone 'cieg019f20' >
- Transcript 'KH2012:KH.C14.232.v1...' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.2085720-2098955.15893.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
R16 [2,086,229 / 2,098,821]
Amino acid sequence
Length: 642
>Cisavi.CG.ENS81.R16.2085720-2098955.15893.p
YSMPGILHFIQHEWSRFEMERAQWDVEKAELQARIAFLQGERKGQENLKRDLIRRIKMLE
FALKQERAKVHKLKFGTDLSVEQKHNESNDESKTNELQTTNAHMSWRHGRQLLRQYLQEV
GYSETILDVRSQRVRALLGNNYDAPKPVENDNQVVNGNISDEEKQSNTDGNTESIFKDFN
FLNAEDNDNEDDEDVNMQDEDVTDDGDHQRKARAKVSSLFLLLRLYEEMALAEFDFLNPT
AAEPGIGSEMSRATEEPYNLLNVFHSESLPFTVGGTHMGDESIENALGLGALAGLTVANE
ADPLSYDIAATKESYRKTWNPKYTLRSHFDGIRAIRFLPNESAVITASEDHTMKLWNLNK
PLPSKKTQSLDVEPIYSFRGHSGAVLSLEVDADGSYCFSGGLDASVRVWSIPSVEIDAYD
TYDPAVIQKVLVGHTDAVWSLSYSSTRQQLLSASSDCSVRLWNPTSNDPLIQTYTTEGIP
TSVCFVQCDSNHAVVSHTDGKINLYDLETGQISLVLAEGDGSKYIDCSVNCVASHPTMPI
TMTAHDDKHIKFFDNSSGKLIHSMVAHLDSVTSLSVDPNGLYLLSGSHDCSIRLWNLDSK
TCIQELTSHRKKFDESIYSVAFHPSATYIASAGADALAKIFV
Nucleotide sequence
Length: 1,929
>Cisavi.CG.ENS81.R16.2085720-2098955.15893.t
TATTCAATGCCAGGAATTCTTCACTTCATCCAGCATGAATGGTCGAGGTTCGAGATGGAA
CGTGCTCAGTGGGATGTTGAGAAAGCTGAGTTACAGGCAAGAATTGCATTTCTACAGGGA
GAGCGAAAAGGCCAAGAAAATTTAAAACGAGACTTAATACGAAGAATAAAGATGCTGGAA
TTTGCTTTGAAGCAAGAAAGAGCAAAAGTCCACAAGTTAAAATTCGGAACAGATTTAAGC
GTCGAACAAAAGCACAATGAATCAAATGATGAGTCAAAAACGAATGAACTTCAAACAACC
AATGCTCATATGTCATGGCGCCATGGGCGACAATTGCTGAGGCAATACCTACAAGAAGTG
GGGTATAGTGAAACAATACTCGACGTACGCTCCCAGCGAGTTCGTGCTCTGCTTGGGAAT
AATTACGACGCTCCAAAACCAGTGGAAAACGACAATCAGGTCGTTAATGGCAACATTTCA
GATGAAGAAAAACAATCGAATACGGATGGGAACACCGAGAGCATCTTCAAGGACTTCAAC
TTCCTCAACGCAGAAGACAATGACAACGAAGATGACGAGGATGTTAACATGCAGGATGAG
GATGTTACTGATGACGGGGATCATCAGAGGAAAGCCAGAGCAAAGGTTTCTTCTTTGTTT
CTATTGTTGAGACTTTATGAGGAAATGGCTCTTGCTGAGTTTGATTTCCTTAATCCAACA
GCCGCTGAACCTGGTATAGGATCAGAGATGTCCCGGGCAACAGAGGAGCCATATAATCTC
CTTAATGTTTTCCATTCAGAATCTCTCCCATTCACGGTCGGTGGAACTCACATGGGAGAT
GAATCGATTGAAAACGCTCTCGGACTTGGAGCATTGGCTGGCCTTACTGTGGCCAATGAA
GCCGACCCACTTTCTTACGATATCGCTGCGACAAAGGAATCATACCGCAAAACCTGGAAT
CCCAAATACACTCTCCGGAGCCATTTCGACGGGATCCGAGCGATTAGGTTCCTCCCAAAC
GAGTCCGCGGTGATCACAGCATCGGAGGATCACACGATGAAGCTCTGGAACCTCAACAAG
CCGCTTCCGAGCAAGAAGACCCAGTCGCTAGATGTGGAGCCGATATATAGCTTCAGAGGA
CACTCTGGTGCAGTTCTCAGTCTTGAAGTGGATGCTGATGGCTCGTATTGCTTCAGTGGT
GGGTTGGATGCCAGCGTTCGTGTGTGGTCCATACCTAGTGTGGAAATTGATGCTTACGAT
ACTTATGACCCAGCGGTCATCCAGAAAGTGCTGGTCGGTCACACAGACGCAGTGTGGTCG
CTCTCGTACTCCAGCACTCGTCAACAATTGTTGTCGGCCTCGTCAGATTGCTCGGTCAGA
CTGTGGAATCCAACATCAAATGATCCACTTATTCAAACCTACACAACCGAAGGAATCCCC
ACATCAGTGTGCTTCGTCCAGTGTGATTCCAACCACGCCGTCGTATCCCACACTGATGGG
AAGATCAACCTGTACGACCTGGAAACTGGACAAATTTCCCTCGTGCTTGCTGAAGGAGAT
GGAAGTAAGTACATTGACTGCAGTGTCAACTGCGTGGCAAGTCACCCCACGATGCCAATA
ACCATGACAGCTCATGACGACAAACACATTAAATTCTTTGACAACTCGTCAGGCAAATTG
ATCCATTCTATGGTAGCACATCTGGACTCTGTCACCAGTTTATCTGTTGATCCTAATGGT
CTTTACCTGCTTTCTGGAAGCCATGACTGTTCGATCCGTTTATGGAACCTGGACAGCAAG
ACTTGTATACAAGAGCTCACTTCGCATAGGAAAAAGTTTGATGAATCGATTTACTCGGTT
GCATTTCACCCCAGCGCCACATACATAGCCAGCGCCGGTGCCGACGCTTTAGCAAAGATT
TTTGTATAG
| Pfam |
Striatin_N (IPR013258) - T[3-127] 1.2E-43 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[306-418] 5.4E-21 - T[419-525] 8.3E-21 - T[526-642] 5.9E-28 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[317-641] 4.27E-68 |
| SMART |
WD40_repeat (IPR001680) - T[318-357] 8.7E-7 - T[371-410] 1.9E-8 - T[424-463] 3.0E-8 - T[467-506] 0.79 - T[509-554] 4.7 - T[557-596] 4.4E-10 - T[599-642] 1.4E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[319-357] 1.8E-4 - T[373-410] 3.0E-5 - T[428-463] 3.2E-5 - T[558-596] 1.5E-8 - T[601-640] 0.0055 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[325-359] 13.416 - T[378-411] 13.215 - T[431-472] 13.984 - T[564-605] 15.655 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[325-642] 43.608 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[344-358] . - T[583-597] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[344-358] 5.8E-6 - T[450-464] 5.8E-6 - T[583-597] 5.8E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 60.779 % | 490 | 2.03E-164 |
| STRN_HUMAN | 49.031 % | 477 | 1.87E-159 |
| STRN4_HUMAN | 46.373 % | 585 | 0 |