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TRANSCRIPT CARD

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  1. Clone 'cima022k01'
  2. Transcript 'Cisavi.CG.ENS81.R16....'
  3. Clone 'cicl029f19'
  4. Transcript 'Cisavi.CG.ENS81.R16....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R16.2537745-2548355.16589.t

Possible name(s)

AP1B1; AP2B1; AP3B2

Location

R16 [2,537,744 / 2,548,355]

Sequences

Amino acid sequence

Length: 783

>Cisavi.CG.ENS81.R16.2537745-2548355.16589.p
MSDSRYFTTTKKGEIFELKADLNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVINCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFDCDDPNPLIRALAVRTMGCIRVDKITEYL
CEPLRKCLKDEDPYVRKTAAVCVAKLYDINNQMVEEQGFLDALKDLLSDSNPMLSCYKYY
GVITTVFFNPSIYWVVANAVASLSEIGESSTRAADQVNFMNTQTVNKLLTALNECTEWGQ
IFILDALANYNPEDTREAQSIAERVTPRLQHANSAVVLSAVKVCMKLLELMDSDKEYQGN
LLKKLAPPLVTLLSAEPEIQYVALRNINLIVQKRPSILKHEMKVFFVKYNDPIYVKLEKL
DIMIRLASQSNIAQVLAELKEYAQEVDVDFVRKSVRAIGRCAIKVEQSSERCVSTLLDLI
QTKVNYVVQEAIVVIKDIFRKYPNKYESIIANLCENLDTLDEPEARASMIWIVGEYAERI
DNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKKPTETQELVQSVLSLATQDSDNPDL
RDRGYIYWRLLSTDPAAAKDVVLAEKPLISEETDLIEPTLLDELICHIASLASVYHKPPS
SFIEGERGVAAMRKSLHKAASPEGGTSEPEMASPTQAPQVSWVIPTQDAMVSDLLGLDLG
TNMVQPSMPAPMASNPMDQLGGLDYLMGGPSMGAAAPIANPLANPMGGQPAQSMDNSLLG
LDFSQSGGSYAPPKQVWLAATAAKGLELKGTFQRRQKEIFMDLTFTNRAMQPMTGFAIQF
NKN

Nucleotide sequence

Length: 2,382

>Cisavi.CG.ENS81.R16.2537745-2548355.16589.t
ATTGCATCTTTGTGTATAAATCGGTCGAAAAATGAGTGACTCCAGATATTTTACCACCAC
CAAGAAAGGTGAGATCTTTGAGTTGAAGGCGGATTTAAACAGCGACAAAAAAGAGAAAAA
GAAGGAAGCTGTCAAGAAAGTCATCGCAAGTATGACTGTGGGCAAAGATGTCAGTGCCCT
TTTCCCTGATGTCATAAACTGCATGCAAACAGACAATCTTGAACTGAAAAAGCTGGTGTA
CTTATACCTGATGAACTACGCAAAGAGTCAACCGGATATGGCGATCATGGCGGTTAACAC
TTTTGATTGTGATGATCCAAATCCACTGATTCGAGCACTGGCTGTACGAACAATGGGCTG
CATTCGAGTGGATAAAATCACAGAGTACTTGTGTGAGCCACTCAGGAAATGTCTCAAGGA
TGAGGATCCTTATGTTCGAAAGACAGCAGCAGTGTGTGTTGCAAAGCTGTATGACATCAA
CAATCAAATGGTGGAAGAACAAGGCTTCCTCGATGCTCTTAAGGATTTGCTCTCAGATTC
CAATCCTATGCTTTCGTGTTATAAATACTATGGAGTCATTACTACAGTTTTTTTTAATCC
ATCAATCTACTGGGTTGTCGCAAATGCTGTTGCGTCTCTGTCAGAAATTGGAGAGAGTTC
CACACGTGCTGCTGACCAAGTCAACTTCATGAATACCCAGACAGTCAACAAGCTGCTCAC
AGCGCTCAACGAGTGCACAGAGTGGGGGCAGATATTCATACTCGATGCACTCGCCAACTA
CAACCCTGAGGACACAAGAGAAGCCCAGAGCATAGCGGAAAGAGTAACGCCACGTCTTCA
ACATGCTAACTCAGCTGTGGTGTTATCTGCTGTTAAGGTCTGCATGAAGTTGCTTGAACT
GATGGATTCAGACAAGGAATACCAGGGCAACCTGCTGAAGAAGTTGGCTCCTCCACTCGT
CACTCTGCTATCGGCTGAACCCGAGATTCAGTATGTTGCTCTCAGAAACATCAACCTTAT
TGTGCAAAAACGGCCCAGCATTCTTAAGCATGAAATGAAGGTTTTCTTTGTCAAGTACAA
CGACCCTATTTATGTGAAACTGGAAAAACTTGACATTATGATCAGACTTGCCTCTCAATC
TAACATCGCACAGGTTTTGGCGGAACTAAAAGAATATGCTCAGGAAGTTGATGTGGATTT
TGTGAGGAAATCTGTAAGAGCTATTGGCCGATGTGCAATTAAAGTGGAGCAATCATCTGA
GAGGTGCGTGAGCACTTTGTTGGACTTGATTCAAACCAAGGTTAACTATGTAGTACAGGA
GGCAATAGTGGTCATCAAGGATATTTTCCGCAAGTACCCAAACAAGTACGAGAGCATTAT
CGCCAATCTTTGTGAGAATCTGGACACATTGGATGAGCCAGAAGCTCGTGCTTCCATGAT
ATGGATTGTTGGAGAATATGCTGAGAGGATCGATAATGCTGATGAACTGCTTGAGAGCTT
TTTGGAAGGTTTCCATGATGAAAATACCCAGGTTCAGTTACAATTGCTGACAGCCATTGT
GAAGCTGTTCCTCAAGAAGCCAACTGAAACGCAAGAACTGGTGCAATCAGTGCTCAGTCT
GGCCACCCAGGACAGTGACAACCCTGATCTGAGAGATCGAGGATACATATACTGGAGACT
CCTCTCCACTGATCCTGCTGCAGCCAAGGACGTAGTGCTCGCTGAAAAGCCGCTGATCTC
TGAGGAGACAGACTTGATCGAGCCGACTCTCCTCGACGAGCTGATCTGCCACATCGCTTC
CCTTGCATCCGTCTACCACAAACCTCCGAGCTCCTTCATCGAGGGAGAACGTGGAGTGGC
CGCCATGCGCAAATCTCTCCACAAAGCTGCTTCGCCAGAAGGTGGCACCAGTGAGCCTGA
AATGGCGTCTCCCACACAAGCACCACAGGTCAGCTGGGTGATCCCCACCCAGGATGCGAT
GGTCAGTGATCTCCTGGGGTTAGACCTGGGTACAAATATGGTTCAACCCTCCATGCCTGC
CCCAATGGCCTCAAACCCCATGGACCAACTTGGGGGGCTCGATTATTTGATGGGTGGTCC
CAGTATGGGTGCAGCGGCTCCAATTGCTAACCCCTTGGCCAACCCAATGGGTGGCCAGCC
TGCGCAAAGCATGGACAATTCTCTTCTGGGTCTGGACTTCTCACAATCAGGGGGCTCGTA
TGCCCCTCCCAAACAGGTTTGGCTCGCGGCCACCGCTGCGAAAGGATTGGAGCTGAAAGG
AACCTTCCAGAGGAGACAGAAGGAGATCTTCATGGACCTCACCTTCACCAACCGAGCGAT
GCAGCCGATGACCGGATTCGCGATCCAATTCAATAAAAACAG

InterProScan

PANTHER
AP_beta (IPR026739) - T[1-783] 0.0
Gene3D
ARM-like (IPR011989) - T[1-612] 1.4E-259
PIRSF
AP_complex_bsu_1_2_4 (IPR016342) - T[1-783] 1.4E-295
SUPERFAMILY
ARM-type_fold (IPR016024) - T[9-602] 1.44E-131
Pfam
Clathrin/coatomer_adapt-like_N (IPR002553) - T[14-553] 4.7E-154
Gene3D
Clathrin_b-adaptin_app_Ig-like (IPR013037) - T[728-783] 5.4E-22
SUPERFAMILY
Clathrin_app_Ig-like_sf (IPR013041) - T[730-783] 1.01E-14
Pfam
Clathrin_a/b/g-adaptin_app_Ig (IPR008152) - T[737-782] 7.2E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
AP3B2_HUMAN 29.77 % 261 2.81E-74
AP2B1_HUMAN 72.727 % 1112 0
AP1B1_HUMAN 74.166 % 1111 0