- Clone 'cima022k01' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.2537745-2548355.16590.t
Possible name(s)
AP1B1; AP2B1; AP3B2
Gene model
Location
R16 [2,537,747 / 2,548,355]
Amino acid sequence
Length: 756
>Cisavi.CG.ENS81.R16.2537745-2548355.16590.p
KMSDSRYFTTTKKGEIFELKADLNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVINCMQ
TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCDDPNPLIRALAVRTMGCIRVDKIT
EYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINNQMVEEQGFLDALKDLLSDSNPMVVAN
AVASLSEIGESSTRAADQVNFMNTQTVNKLLTALNECTEWGQIFILDALANYNPEDTREA
QSIAERVTPRLQHANSAVVLSAVKVCMKLLELMDSDKEYQGNLLKKLAPPLVTLLSAEPE
IQYVALRNINLIVQKRPSILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQSNIAQVLAE
LKEYAQEVDVDFVRKSVRAIGRCAIKVEQSSERCVSTLLDLIQTKVNYVVQEAIVVIKDI
FRKYPNKYESIIANLCENLDTLDEPEARASMIWIVGEYAERIDNADELLESFLEGFHDEN
TQVQLQLLTAIVKLFLKKPTETQELVQSVLSLATQDSDNPDLRDRGYIYWRLLSTDPAAA
KDVVLAEKPLISEETDLIEPTLLDELICHIASLASVYHKPPSSFIEGERGVAAMRKSLHK
AAYLKSNFLFPNVPQVIPTQDAMVSDLLGLDLGTNMVQPSMPAPMASNPMDQLGGLDYLM
GGPSMGAAAPIANPLANPMGGQPAQSMDNSLLGLDFSQSGGSYAPPKQVWLAATAAKGLE
LKGTFQRRQKEIFMDLTFTNRAMQPMTGFAIQFNKN
Nucleotide sequence
Length: 2,295
>Cisavi.CG.ENS81.R16.2537745-2548355.16590.t
GCATCTTTGTGTATAAATCGGTCGAAAAATGAGTGACTCCAGATATTTTACCACCACCAA
GAAAGGTGAGATCTTTGAGTTGAAGGCGGATTTAAACAGCGACAAAAAAGAGAAAAAGAA
GGAAGCTGTCAAGAAAGTCATCGCAAGTATGACTGTGGGCAAAGATGTCAGTGCCCTTTT
CCCTGATGTCATAAACTGCATGCAAACAGACAATCTTGAACTGAAAAAGCTGGTGTACTT
ATACCTGATGAACTACGCAAAGAGTCAACCGGATATGGCGATCATGGCGGTTAACACTTT
TGTCAAAGATTGTGATGATCCAAATCCACTGATTCGAGCACTGGCTGTACGAACAATGGG
CTGCATTCGAGTGGATAAAATCACAGAGTACTTGTGTGAGCCACTCAGGAAATGTCTCAA
GGATGAGGATCCTTATGTTCGAAAGACAGCAGCAGTGTGTGTTGCAAAGCTGTATGACAT
CAACAATCAAATGGTGGAAGAACAAGGCTTCCTCGATGCTCTTAAGGATTTGCTCTCAGA
TTCCAATCCTATGGTTGTCGCAAATGCTGTTGCGTCTCTGTCAGAAATTGGAGAGAGTTC
CACACGTGCTGCTGACCAAGTCAACTTCATGAATACCCAGACAGTCAACAAGCTGCTCAC
AGCGCTCAACGAGTGCACAGAGTGGGGGCAGATATTCATACTCGATGCACTCGCCAACTA
CAACCCTGAGGACACAAGAGAAGCCCAGAGCATAGCGGAAAGAGTAACGCCACGTCTTCA
ACATGCTAACTCAGCTGTGGTGTTATCTGCTGTTAAGGTCTGCATGAAGTTGCTTGAACT
GATGGATTCAGACAAGGAATACCAGGGCAACCTGCTGAAGAAGTTGGCTCCTCCACTCGT
CACTCTGCTATCGGCTGAACCCGAGATTCAGTATGTTGCTCTCAGAAACATCAACCTTAT
TGTGCAAAAACGGCCCAGCATTCTTAAGCATGAAATGAAGGTTTTCTTTGTCAAGTACAA
CGACCCTATTTATGTGAAACTGGAAAAACTTGACATTATGATCAGACTTGCCTCTCAATC
TAACATCGCACAGGTTTTGGCGGAACTAAAAGAATATGCTCAGGAAGTTGATGTGGATTT
TGTGAGGAAATCTGTAAGAGCTATTGGCCGATGTGCAATTAAAGTGGAGCAATCATCTGA
GAGGTGCGTGAGCACTTTGTTGGACTTGATTCAAACCAAGGTTAACTATGTAGTACAGGA
GGCAATAGTGGTCATCAAGGATATTTTCCGCAAGTACCCAAACAAGTACGAGAGCATTAT
CGCCAATCTTTGTGAGAATCTGGACACATTGGATGAGCCAGAAGCTCGTGCTTCCATGAT
ATGGATTGTTGGAGAATATGCTGAGAGGATCGATAATGCTGATGAACTGCTTGAGAGCTT
TTTGGAAGGTTTCCATGATGAAAATACCCAGGTTCAGTTACAATTGCTGACAGCCATTGT
GAAGCTGTTCCTCAAGAAGCCAACTGAAACGCAAGAACTGGTGCAATCAGTGCTCAGTCT
GGCCACCCAGGACAGTGACAACCCTGATCTGAGAGATCGAGGATACATATACTGGAGACT
CCTCTCCACTGATCCTGCTGCAGCCAAGGACGTAGTGCTCGCTGAAAAGCCGCTGATCTC
TGAGGAGACAGACTTGATCGAGCCGACTCTCCTCGACGAGCTGATCTGCCACATCGCTTC
CCTTGCATCCGTCTACCACAAACCTCCGAGCTCCTTCATCGAGGGAGAACGTGGAGTGGC
CGCCATGCGCAAATCTCTCCACAAAGCTGCGTATTTAAAATCCAATTTCTTATTTCCAAA
CGTTCCCCAGGTGATCCCCACCCAGGATGCGATGGTCAGTGATCTCCTGGGGTTAGACCT
GGGTACAAATATGGTTCAACCCTCCATGCCTGCCCCAATGGCCTCAAACCCCATGGACCA
ACTTGGGGGGCTCGATTATTTGATGGGTGGTCCCAGTATGGGTGCAGCGGCTCCAATTGC
TAACCCCTTGGCCAACCCAATGGGTGGCCAGCCTGCGCAAAGCATGGACAATTCTCTTCT
GGGTCTGGACTTCTCACAATCAGGGGGCTCGTATGCCCCTCCCAAACAGGTTTGGCTCGC
GGCCACCGCTGCGAAAGGATTGGAGCTGAAAGGAACCTTCCAGAGGAGACAGAAGGAGAT
CTTCATGGACCTCACCTTCACCAACCGAGCGATGCAGCCGATGACCGGATTCGCGATCCA
ATTCAATAAAAACAG
| PIRSF |
AP_complex_bsu_1_2_4 (IPR016342) - T[1-756] 9.9E-304 |
| PANTHER |
AP_beta (IPR026739) - T[2-756] 0.0 |
| Gene3D |
ARM-like (IPR011989) - T[2-594] 1.3E-267 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[10-584] 9.46E-142 |
| Pfam |
Clathrin/coatomer_adapt-like_N (IPR002553) - T[15-535] 9.8E-161 |
| Gene3D |
Clathrin_b-adaptin_app_Ig-like (IPR013037) - T[701-756] 5.2E-22 |
| SUPERFAMILY |
Clathrin_app_Ig-like_sf (IPR013041) - T[703-756] 9.77E-15 |
| Pfam |
Clathrin_a/b/g-adaptin_app_Ig (IPR008152) - T[710-755] 6.9E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AP3B2_HUMAN | 30.835 % | 278 | 1.87E-80 |
| AP2B1_HUMAN | 75 % | 1130 | 0 |
| AP1B1_HUMAN | 75.99 % | 1123 | 0 |