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TRANSCRIPT CARD

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  1. Region 'REG00001575' > 
  2. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  3. Clone 'cima881282' > 
  4. Clone 'cien46735' > 
  5. Transcript 'Cisavi.CG.ENS81.R162...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R162.92333-96466.01141.t

Possible name(s)

EIF4A1; EIF4A2; EIF4A3

Gene model

Cisavi.CG.ENS81.R162.92333-96466

Location

R162 [92,332 / 94,986]

Sequences

Amino acid sequence

Length: 377

>Cisavi.CG.ENS81.R162.92333-96466.01141.p
IVDSFDDMNLKEELLRGIYAYGFEKPSAIQQRAILPCIEGKDVIAQAQSGTGKTATFAIS
ILQKIDTSVKKTQALVIAPTRELAQQIQKVVMALGDYEGVNCHACIGGTSVKTEIQIFQN
SPPHIVVGTPGRVFDMINRKHLDTDHVRMFVLDEADEMLSRGFKDQIYDIFRTMPSTIQV
ILLSATMPADVLDVTSCFMPDPIRILVKKEELTLEGIQQFYVFVEKEEWKLETLCDLYET
LTITQAVIFLNTRRKVDWLTHELQERDFTVSALHGDMEQGARDVIMREFRSGSSRVLITT
DLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTDDDKRTLKDIEK
FYNTKIDEMPMNVADLF

Nucleotide sequence

Length: 1,339

>Cisavi.CG.ENS81.R162.92333-96466.01141.t
CGACAACGTGAGTCTGACTAACTGCATACTCGTTCTTTTCTGATAAACCATGTCACGTTA
CGCAGGAAACGATTTTAAAGGCCCTAAAGGTGGTGAAGGTCAATATGATGGCTTCAACAA
CCAAAAAGATGATGGTGCGCCTAGAGATTATAATGGACCACCTGGAATGGACACCGATGG
TTTGATAGAGACAAATTATGACAAAATTGTTGATTCTTTTGATGACATGAACCTAAAGGA
AGAACTTCTCAGGGGTATTTATGCCTATGGCTTCGAAAAACCATCAGCTATTCAACAAAG
AGCAATTCTGCCTTGTATTGAAGGAAAAGATGTGATTGCACAAGCGCAATCTGGTACGGG
TAAAACTGCAACATTTGCAATTTCAATTTTACAAAAAATTGATACATCAGTTAAAAAAAC
TCAGGCTTTGGTCATTGCTCCTACCAGGGAATTGGCTCAGCAGATCCAGAAAGTAGTCAT
GGCACTAGGTGACTATGAAGGAGTAAATTGTCATGCTTGCATTGGTGGTACCAGTGTGAA
AACTGAAATTCAGATATTCCAAAACTCCCCACCACATATTGTTGTTGGTACACCTGGTCG
TGTGTTTGACATGATCAACCGTAAACATCTCGACACCGATCATGTGCGGATGTTTGTACT
TGATGAAGCTGATGAGATGTTGTCAAGGGGATTTAAAGATCAAATATATGATATCTTCAG
AACTATGCCTTCTACAATTCAAGTGATATTACTCTCGGCTACAATGCCAGCAGATGTGCT
TGATGTAACATCTTGCTTTATGCCTGATCCAATTCGAATCCTTGTCAAGAAAGAGGAACT
CACACTTGAGGGTATCCAACAATTCTATGTATTTGTGGAAAAGGAAGAATGGAAGCTTGA
AACACTGTGTGATCTTTATGAAACACTGACAATTACCCAAGCCGTGATTTTCTTAAACAC
CAGAAGGAAAGTTGACTGGCTTACCCATGAACTGCAGGAAAGAGATTTTACTGTGTCAGC
ACTGCATGGAGATATGGAGCAAGGTGCACGTGATGTGATCATGCGCGAATTCCGATCTGG
TTCCTCCCGTGTTCTAATCACCACAGACCTGCTTGCTCGTGGCATTGATGTGCAGCAAGT
CTCACTCGTCATTAACTATGACTTGCCATCCAATCGTGAAAACTACATTCACCGAATTGG
TCGTGGTGGAAGGTTTGGGAGGAAAGGTGTTGCAATTAACTTCGTTACCGATGACGACAA
GCGTACTCTAAAAGATATTGAAAAATTTTACAATACTAAGATTGATGAAATGCCAATGAA
TGTGGCTGACCTTTTCTAG

InterProScan

PANTHER
EIF4A (IPR037583) - T[1-376] 1.8E-193
ProSiteProfiles
RNA_helicase_DEAD_Q_motif (IPR014014) - T[3-31] 11.105
SMART
Helicase_ATP-bd (IPR014001) - T[22-220] 4.2E-60
Pfam
DEAD/DEAH_box_helicase_dom (IPR011545) - T[28-192] 2.2E-46
ProSiteProfiles
Helicase_ATP-bd (IPR014001) - T[34-205] 30.905
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[71-359] 1.65E-74
ProSitePatterns
RNA-helicase_DEAD-box_CS (IPR000629) - T[151-159] .
ProSiteProfiles
Helicase_C (IPR001650) - T[216-377] 27.165
CDD
Helicase_C (IPR001650) - T[217-332] 1.17064E-32
Pfam
Helicase_C (IPR001650) - T[230-338] 7.1E-30
SMART
Helicase_C (IPR001650) - T[257-338] 7.3E-34

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
IF4A3_HUMAN 68.085 % 550 0
IF4A1_HUMAN 81.649 % 617 0
IF4A2_HUMAN 81.117 % 612 0