- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.4290170-4298661.19767.t
Possible name(s)
SELE; SELP; SVEP1
Gene model
Location
R16 [4,290,169 / 4,298,661]
Amino acid sequence
Length: 354
>Cisavi.CG.ENS81.R16.4290170-4298661.19767.p
MGSDGGLVGRWSDYAPVCLRKSCPAQLLDPMNGQTICTDAIFLGSECEFTCHDNHMRVGP
LYSNCIELEDGSVVWDRPVPKCEPIKCPDQFPLAHGEMTCSKSNFATSRCQFRCTADNYQ
LYPPTTENHCLNTSNWDVPKPCCARPCPPFAVMDFVVVLDSSSSVGIENWMKVKKFTHQF
LSTFTLSPEGSQYSVFRYNREVDTHSQILLQDHQTNMDDFMYAFDDIPYDGSGTHTGNAI
NHVVDYILAPGKGNRPNAQDIVLLITDGRSQDSVRRPAQRLRQTGATVFVLPILPPRGRL
DMAQVREIAGREENIITDAIEGGFEALTAQFSKKVGDMICRNPCKHTLHDHLAL
Nucleotide sequence
Length: 1,638
>Cisavi.CG.ENS81.R16.4290170-4298661.19767.t
GGAACATCGAATTGAGAAACATGAAGATCGTATCTATAATTTGTTTAGTTGCGAGTCTTG
CATACTCTTCAGCAATCAGGTGTTGGGAGTGCAACAACGTATTCTCGAACGAGGAATGTC
TGACAACTGGAAAACTCGTCCGATGCCAAGCTAATCAGGACGCTTGTCAAATCGAGTTGC
GTCACGGTGGTTGCAGCAATTGTGTGTCTTCCCCTTCACGAGGCCCCCACCAACGGGTTC
GTCAGCTGCACAAATGACGCTTTCTTGGGCAGTGTGTGTGAATTCTCTTGTGACGATAGT
TATAAGTTGATCGGAAACCCCATATGTTCATGCACAATGGGCAGTGATGGTGGTCTGGTC
GGACGCTGGAGTGATTACGCGCCTGTTTGTCTGCGAAAATCATGTCCCGCCCAGCTGTTG
GACCCTATGAACGGGCAGACTATCTGCACCGACGCGATTTTCCTTGGTTCCGAGTGCGAA
TTCACCTGCCATGACAACCATATGCGTGTGGGACCACTCTACAGCAACTGCATTGAACTT
GAGGATGGTTCAGTGGTGTGGGATCGGCCAGTGCCAAAGTGTGAACCAATTAAATGCCCG
GATCAATTCCCTCTTGCTCATGGAGAGATGACCTGCTCAAAGAGCAACTTCGCCACCTCA
CGATGCCAATTCCGATGCACTGCTGATAACTACCAGTTATATCCCCCTACCACAGAGAAC
CACTGCTTGAACACATCGAACTGGGATGTGCCGAAGCCGTGCTGTGCAAGGCCGTGTCCT
CCATTCGCTGTGATGGACTTCGTTGTTGTCCTCGACTCCTCTTCTTCAGTCGGCATTGAA
AACTGGATGAAAGTGAAAAAATTCACTCATCAGTTTTTGTCCACCTTCACCCTTTCACCC
GAAGGAAGTCAGTACTCGGTGTTTCGCTACAACAGAGAAGTCGACACTCATTCCCAGATC
TTGTTGCAAGACCACCAAACTAACATGGACGACTTCATGTATGCATTTGACGACATTCCC
TATGATGGTTCAGGCACACACACTGGAAATGCGATCAACCACGTTGTCGACTATATTCTT
GCCCCGGGTAAGGGGAACCGTCCCAACGCACAGGATATCGTGTTGCTTATAACTGATGGA
AGATCTCAGGATTCAGTTCGACGGCCCGCTCAACGACTTCGACAGACTGGTGCCACAGTG
TTTGTACTTCCAATCTTGCCACCACGTGGACGGCTGGATATGGCTCAAGTACGAGAGATC
GCTGGGCGCGAGGAAAATATCATCACCGACGCGATTGAGGGAGGGTTCGAGGCACTCACA
GCACAATTCTCCAAGAAAGTCGGCGACATGATCTGCAGGAACCCATGCAAGCACACTCTG
CATGACCATCTTGCTTTGTAATGTCACAGTCGACGTTTATTAAATTGTTGTGATGTTAAA
ACCAGTACCAAGTATAACCAGTGTTGTTTGTATTCCATATTGATTTGTGCCTACATAATT
TATTCGTGTGAAGTGTTACTAAATGGTATTCCTTTCATGTATGCCATATTGTGTTTTAAT
TTATTCCTATTTATTGTTAAATAACAAAATTTTCTTTTGTGCCACTGATTACAATTAAAC
ACACGGTACAAATTTTTT
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[21-84] 7.588 - T[85-145] 7.298 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[23-82] 1.4E-5 - T[87-143] 2.8 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[23-83] 4.97149E-6 - T[87-143] 3.32017E-4 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[29-96] 5.14E-11 - T[82-146] 9.31E-6 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[29-82] 0.0011 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[147-341] 1.46E-39 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[152-349] 2.1E-37 |
| SMART |
VWF_A (IPR002035) - T[152-328] 1.4E-28 |
| Pfam |
VWF_A (IPR002035) - T[154-313] 1.2E-30 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[154-335] 23.478 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COCA1_HUMAN | 36.429 % | 105 | 1.48E-24 |
| COEA1_HUMAN | 29.448 % | 82 | 7.46E-17 |
| CO6A6_HUMAN | 30.769 % | 92.8 | 1.8E-20 |