Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R16.4290170-4298661.19771.t

Possible name(s)

SELE; SELP; SVEP1

Gene model

Cisavi.CG.ENS81.R16.4290170-4298661

Location

R16 [4,294,857 / 4,297,780]

Sequences

Amino acid sequence

Length: 135

>Cisavi.CG.ENS81.R16.4290170-4298661.19771.p
MDFVVVLDSSSSVGIENWMKVKKFTHQFLSTFTLSPEGSQYSVFRYNREVDTHSQILLQD
HQTNMDDFMYAFDDIPYDGSGTHTGNAINHVVDYILAPGKGNRPNAQDIVLLITDGRSQD
SVRRPAQRLRQTGAT

Nucleotide sequence

Length: 886

>Cisavi.CG.ENS81.R16.4290170-4298661.19771.t
GCAGCAATTGTGTGTCTTCCCCTTCACGAGGCCCCCACCAACGGGTTCGTCAGCTGCACA
AATGACGCTTTCTTGGGCAGTGTGTGTGAATTCTCTTGTGACGATAGTTATAAGTTGATC
GGAAACCCCATATGTTCATGCACAATGGGCAGTGATGGTGGTCTGGTCGGACGCTGGAGT
GATTACGCGCCTGTTTGTCTGCGAAAATCATGTCCCGCCATTGAACTTGAGGATGGTTCA
GTGGTGTGGGATCGGCCAGTGCCAAAGTGTGAACCAATTAAATGCCCGGATCAATTCCCT
CTTGCTCATGGAGAGATGACCTGCTCAAAGAGCAACTTCGCCACCTCACGATGCCAATTC
CGATGCACTGCTGATAACTACCAGTTATATCCCCCTACCACAGAGAACCACTGCTTGAAC
ACATCGAACTGGGATGTGCCGAAGCCGTGCTGTGCAAGCCGTGTCCTCCATTCGCTGTGA
TGGACTTCGTTGTTGTCCTCGACTCCTCTTCTTCAGTCGGCATTGAAAACTGGATGAAAG
TGAAAAAATTCACTCATCAGTTTTTGTCCACCTTCACCCTTTCACCCGAAGGAAGTCAGT
ACTCGGTGTTTCGCTACAACAGAGAAGTCGACACTCATTCCCAGATCTTGTTGCAAGACC
ACCAAACTAACATGGACGACTTCATGTATGCATTTGACGACATTCCCTATGATGGTTCAG
GCACACACACTGGAAATGCGATCAACCACGTTGTCGACTATATTCTTGCCCCGGGTAAGG
GGAACCGTCCCAACGCACAGGATATCGTGTTGCTTATAACTGATGGAAGATCTCAGGATT
CAGTTCGACGGCCCGCTCAACGACTTCGACAGACTGGTGCCACAGT

InterProScan

Gene3D	vWFA_dom_sf (IPR036465) - T[1-135] 5.8E-33
SUPERFAMILY	vWFA_dom_sf (IPR036465) - T[1-134] 1.59E-33
SMART	VWF_A (IPR002035) - T[1-135] 5.9E-8
ProSiteProfiles	VWF_A (IPR002035) - T[2-135] 21.541
Pfam	VWF_A (IPR002035) - T[2-133] 2.9E-28

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
COCA1_HUMAN	38.168 %	100	8.51E-26
CO6A6_HUMAN	34.848 %	80.1	1.63E-18
MATN2_HUMAN	30.435 %	75.1	8.29E-17