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TRANSCRIPT CARD

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  1. EST 'FF727064.1' > 
  2. Transcript 'KH2012:KH.L98.1.v1.A...' > 
  3. Clone 'cien123230' > 
  4. Transcript 'KH2012:KH.C2.37.v1.A...' > 
  5. Transcript 'Cisavi.CG.ENS81.R16....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R16.4322058-4332854.19776.t

Possible name(s)

TUBA1A; TUBA3C; TUBA3D

Gene model

Cisavi.CG.ENS81.R16.4322058-4332854

Location

R16 [4,322,057 / 4,331,378]

Sequences

Amino acid sequence

Length: 249

>Cisavi.CG.ENS81.R16.4322058-4332854.19776.p
MVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPY
PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD
VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT
AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEA
EDEDEGEEY

Nucleotide sequence

Length: 1,201

>Cisavi.CG.ENS81.R16.4322058-4332854.19776.t
TCAGGTTTCAACCGCTGTTGTTGAGCCATACAACTCCATCCTTACCACTCACACCACCCT
CGAGCACTCCGACTGTGCTTTCATGGTTGACAACGAGGCCATCTACGACATCTGCCGACG
AAACTTGGACATTGAGCGCCCAACTTACACCAACTTGAACAGGTTGATGGGACAAATTGT
GTCCTCCATCACCGCTTCGTTGAGATTCGATGGTGCCCTTAACGTCGATCTTACTGAGTT
CCAGACAAACTTGGTGCCATACCCACGTATCCATTTCCCTCTTGCCACCTACGCCCCTGT
GATCTCGGCCGAGAAGGCTTACCACGAGCAACTCTCCGTTGCCGAGATCACCAACGCTTG
CTTCGAGCCAGCCAACCAGATGGTGAAATGCGACCCACGTCACGGAAAATACATGGCATG
CTGCATGCTGTACCGTGGTGATGTTGTGCCAAAAGATGTCAACGCCGCCATTGCAACCAT
CAAGACCAAGAGAACCATCCAATTCGTCGACTGGTGCCCAACTGGTTTCAAGGTCGGTAT
CAACTACCAACCACCAACTGTTGTACCAGGTGGTGACTTGGCCAAGGTTCAACGCGCCGT
TTGCATGTTGAGCAACACAACCGCCATCGCTGAGGCTTGGGCTCGTCTTGACCACAAGTT
TGACTTGATGTACGCCAAGCGAGCTTTCGTGCATTGGTACGTCGGTGAGGGTATGGAAGA
GGGAGAATTCTCCGAGGCCCGTGAGGATTTGGCCGCCCTTGAGAAGGATTACGAAGAGGT
TGGAGTCGACTCCGTTGAGGCTGAGGACGAAGACGAGGGCGAGGAATATTAAACTCCCGT
CCGTCAAATACTCCCCATCGAATATATCTCTATTTAATTTGTGTTTTGGGGGATTTGGTG
CTTCGGCTACATAATAAAGTACTCAGTAACCACATAATTTTATTAACATAATTAAAACCT
TGGAAGCAGAAACGATAACGAAAACCAGCACATTTAATTTTAAATAAGCCAATATTTTGT
TTTTTTTAAAAAGTATTTTAAACTGCCCTGTATAATTTAATTACACAATAAACAAATTTC
AATTTTATTATTGAACCAATGTTTTATAACTCTTTGATTGTGTGGTTAATTGTCCGGCCA
AATAGCTTGGTGGATTAATAATTTCGAAATGAAAAATAAAATTGAAATATTTCACCTCTG
A

InterProScan

Gene3D
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-66] 1.8E-25
SUPERFAMILY
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-43] 9.42E-10
PANTHER
Tubulin (IPR000217) - T[1-244] 5.0E-181
PRINTS
Alpha_tubulin (IPR002452) - T[12-24] 3.9E-75 - T[72-87] 3.9E-75 - T[119-140] 3.9E-75 - T[145-158] 3.9E-75 - T[158-177] 3.9E-75 - T[183-199] 3.9E-75 - T[220-236] 3.9E-75
SUPERFAMILY
Tub_FtsZ_C (IPR008280) - T[44-235] 9.16E-88
SMART
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[46-191] 1.8E-60
Pfam
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[61-189] 7.8E-52
Gene3D
Tubulin/FtsZ_C_sf (IPR037103) - T[67-181] 2.2E-68
Gene3D
Tubulin_C (IPR023123) - T[182-248] 5.5E-35

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TBA1A_HUMAN 97.59 % 514 0
TBA3C_HUMAN 98.795 % 513 0
TBA3D_HUMAN 98.795 % 513 0