- Transcript 'KH2012:KH.C2.518.v1....' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.4322058-4332854.19779.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
R16 [4,322,203 / 4,324,305]
Amino acid sequence
Length: 441
>Cisavi.CG.ENS81.R16.4322058-4332854.19779.p
KLQRECISIHVGQAGVQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLC
TGLQGFLIFHSFGGGTGSGFTSLLMERLSIDYGKKSKLEFAIYPAPQISTAVVEPYNSIL
TTHTTLEHSDCAFMVDNEAVYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDGALN
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRH
GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE
KDYEEVGVDSVEAEDEDEGEE
Nucleotide sequence
Length: 1,552
>Cisavi.CG.ENS81.R16.4322058-4332854.19779.t
AAATTGCAGCGAGAATGTATCTCTATCCACGTCGGTCAAGCCGGAGTCCAGATTGGTAAC
GCCTGCTGGGAACTGTTCTGTCTAGAACACGGCATCCAACCCGATGGTCAGATGCCAAGT
GACAAGACCATTGGAGGAGGGGACGACTCCTTCAACACCTTCTTCAGCGAGACTGGAGCT
GGAAAGCACGTCCCAAGAGCCGTTTTCGTCGATCTTGAACCAACTGTTGTCGATGAGGTC
CGAACCGGTACTTACCGCCAACTCTTCCACCCGGAACAGTTGATTACCGGCAAAGAGGAT
GCCGCCAACAACTATGCCCGTGGTCACTACACCATCGGTAAAGAAATCGTTGACCTTTGC
ACTGGTCTCCAAGGTTTCCTCATCTTCCACTCCTTCGGAGGAGGCACCGGGTCCGGTTTC
ACCTCTCTTCTCATGGAGAGACTCTCCATAGATTACGGCAAAAAATCTAAATTGGAGTTC
GCCATTTACCCAGCTCCTCAGATCTCAACCGCTGTTGTTGAGCCATACAACTCCATCCTC
ACCACTCACACCACCCTCGAGCATTCCGACTGTGCTTTCATGGTCGACAACGAGGCCGTC
TACGACATCTGCCGACGAAACTTGGACATTGAACGCCCAACTTACACCAACTTGAACAGG
TTGATGGGACAAATCGTGTCCTCCATCACCGCTTCGTTGAGATTCGATGGTGCCCTTAAC
GTCGATTTAACAGAGTTTCAGACGAACTTGGTGCCATACCCACGTATTCATTTTCCTCTT
GCTACCTACGCCCCTGTGATCTCGGCCGAGAAGGCTTACCACGAGCAACTCTCCGTTTCC
GAGATCACCAACGCTTGCTTCGAGCCAGCCAACCAGATGGTGAAATGCGACCCACGTCAC
GGAAAATACATGGCATGCTGCATGCTGTACCGTGGTGATGTTGTGCCAAAAGATGTCAAT
GCCGCCATTGCAACCATCAAGACCAAGAGAACCATCCAATTCGTCGACTGGTGCCCAACT
GGTTTCAAGGTCGGTATCAACTACCAACCACCAACTGTTGTACCAGGTGGTGACTTGGCC
AAGGTTCAACGCGCCGTTTGCATGTTGAGCAACACAACCGCCATCGCTGAGGCTTGGGCT
CGTCTTGACCACAAGTTTGACTTGATGTACGCCAAGCGAGCTTTCGTGCATTGGTACGTC
GGTGAGGGTATGGAAGAGGGAGAATTCTCCGAGGCCCGTGAGGATTTGGCCGCCCTTGAG
AAGGATTACGAAGAGGTTGGAGTCGACTCCGTTGAGGCTGAGGACGAAGACGAGGGCGAG
GAATATTAAACTCCCGTCCGTCAAATACTCCCCATCGAATATATCTCTATTTAATTTGTG
TTTTGGGGGATTTGGTGCTTCGGCTACATAATAAAGTACTCAGTAACCACATAATTTTAT
TAACATAATTAAAACCTTGGAAGCAGAAACGATAACGAAAACCAGCACATTTAATTTTAA
ATAAGCCAATATTTTGTTTTTTTTAAAAAGTATTTTAAACTGCCCTGTATAA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[3-259] 1.3E-119 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[4-235] 1.57E-91 |
| PANTHER |
Tubulin (IPR000217) - T[4-438] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[5-204] 9.5E-59 |
| PRINTS |
Tubulin (IPR000217) - T[12-32] 1.9E-59 - T[55-74] 1.9E-59 - T[144-165] 1.9E-59 - T[169-182] 1.9E-59 - T[183-203] 1.9E-59 - T[371-399] 1.9E-59 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[20-35] 1.2E-100 - T[47-60] 1.2E-100 - T[90-103] 1.2E-100 - T[205-217] 1.2E-100 - T[265-280] 1.2E-100 - T[312-333] 1.2E-100 - T[338-351] 1.2E-100 - T[351-370] 1.2E-100 - T[376-392] 1.2E-100 - T[413-429] 1.2E-100 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[51-237] 3.3E-69 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[133-139] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[237-428] 6.71E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[239-384] 1.4E-59 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[254-382] 2.8E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[260-374] 7.3E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[375-441] 1.4E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 95.546 % | 893 | 0 |
| TBA3D_HUMAN | 95.546 % | 893 | 0 |
| TBA3E_HUMAN | 94.42 % | 878 | 0 |