- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Clone 'ma311m04' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.4322058-4332854.19783.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
R16 [4,326,201 / 4,328,196]
Amino acid sequence
Length: 440
>Cisavi.CG.ENS81.R16.4322058-4332854.19783.p
KLQRECISIHVGQAGVQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLC
TGLQGFLIFHSFGGGTGSGFTSLLMERLSIDYGKKSKLEFAIYPAPQISTAVVEPYNSIL
TTHTTLEHSDCAFMVDNEAVYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDGALN
VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRH
GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
KVQRAVCMLSNTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK
DYEEVGVDSVEGEGEEEGEE
Nucleotide sequence
Length: 1,429
>Cisavi.CG.ENS81.R16.4322058-4332854.19783.t
AAATTGCAGCGAGAATGTATCTCTATCCACGTCGGTCAAGCCGGAGTCCAGATTGGTAAT
GCCTGCTGGGAACTGTTCTGTCTAGAACACGGCATCCAACCCGATGGTCAGATGCCAAGT
GACAAGACCATTGGAGGAGGGGACGACTCCTTCAACACCTTCTTTAGCGAGACTGGAGCT
GGAAAGCACGTCCCAAGAGCCGTTTTCGTCGATCTTGAACCAACTGTTGTCGATGAGGTC
CGAACCGGTACTTACCGCCAACTCTTTCACCCGGAACAGTTGATTACCGGCAAAGAGGAT
GCCGCCAACAACTATGCCCGTGGTCACTACACCATCGGTAAGGAAATCGTTGACCTTTGC
ACTGGCCTCCAAGGTTTCCTCATCTTCCACTCTTTCGGAGGAGGAACTGGGTCCGGTTTT
ACCTCTCTTCTCATGGAGAGACTTTCGATAGATTACGGCAAAAAATCTAAATTGGAGTTC
GCCATTTACCCAGCTCCTCAGATCTCTACCGCTGTTGTTGAGCCATACAACTCCATCCTA
ACCACTCACACCACCCTCGAGCACTCCGACTGTGCTTTCATGGTCGACAACGAGGCCGTC
TACGACATCTGCCGACGAAACTTGGACATTGAGCGCCCAACTTACACCAACTTGAACAGG
TTGATGGGACAAATCGTGTCCTCCATCACCGCTTCGTTGAGATTCGATGGTGCCCTTAAC
GTCGATTTAACAGAGTTTCAGACGAACTTGGTGCCATACCCACGTATTCATTTTCCTCTT
GCTACCTACGCCCCTGTGATCTCGGCCGAGAAGGCTTACCACGAGCAACTCTCCGTTTCC
GAGATCACCAACGCTTGCTTCGAGCCAGCCAACCAGATGGTGAAATGCGACCCACGTCAC
GGAAAATACATGGCATGCTGCATGCTGTACCGTGGTGATGTTGTGCCAAAAGATGTCAAT
GCCGCCATTGCAACCATCAAGACCAAGAGAACCATCCAATTCGTCGACTGGTGCCCAACT
GGTTTCAAGGTCGGTATCAACTACCAACCACCAACTGTTGTACCAGGTGGTGACTTGGCC
AAGGTTCAACGCGCCGTTTGCATGTTGAGCAACACCGCCATCGCTGAGGCTTGGGCTCGT
CTTGACCACAAGTTTGACTTGATGTACGCCAAGCGAGCTTTCGTGCATTGGTACGTCGGT
GAGGGTATGGAAGAGGGAGAATTCTCCGAGGCCCGTGAGGATTTGGCCGCCCTTGAGAAG
GATTACGAAGAGGTTGGAGTCGACTCCGTTGAGGGCGAGGGAGAAGAAGAAGGAGAGGAA
TATTAAACTCCTCTTTAATTACTCCCCATTAAATCAATGTCTGACAACATCTTCATTTAC
TTGGTGTTTTCTTCTTGCTGTTTTATTTGTGCTACATTTCATTGAACGA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[3-259] 1.3E-119 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[4-235] 1.57E-91 |
| PANTHER |
Tubulin (IPR000217) - T[4-437] 3.1E-303 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[5-204] 9.4E-59 |
| PRINTS |
Tubulin (IPR000217) - T[12-32] 1.6E-58 - T[55-74] 1.6E-58 - T[144-165] 1.6E-58 - T[169-182] 1.6E-58 - T[183-203] 1.6E-58 - T[370-398] 1.6E-58 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[20-35] 5.3E-90 - T[47-60] 5.3E-90 - T[90-103] 5.3E-90 - T[205-217] 5.3E-90 - T[265-280] 5.3E-90 - T[312-333] 5.3E-90 - T[338-351] 5.3E-90 - T[351-370] 5.3E-90 - T[412-428] 5.3E-90 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[51-237] 3.3E-69 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[133-139] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[237-427] 1.25E-83 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[239-383] 1.8E-57 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[254-381] 1.9E-48 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[260-373] 2.0E-66 |
| Gene3D |
Tubulin_C (IPR023123) - T[374-440] 1.3E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 94.655 % | 893 | 0 |
| TBA1B_HUMAN | 94.209 % | 890 | 0 |
| TBA3C_HUMAN | 95.1 % | 886 | 0 |