- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.4322058-4332854.19784.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
R16 [4,330,108 / 4,332,854]
Amino acid sequence
Length: 451
>Cisavi.CG.ENS81.R16.4322058-4332854.19784.p
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEGEEEGEEY
Nucleotide sequence
Length: 1,660
>Cisavi.CG.ENS81.R16.4322058-4332854.19784.t
ACGCGATTTGGATTGACCAATCAGAATGCGGGCTCGGTGGAGATATAAACCCGCGCAACG
TTGTAAAGAACATATCTTCTGAACCAGCCACGACACGTAAAGGTCATTAGCTGTTCGAAC
TTTGAATCGATTTTATCGTCAACTTCTCTACTAACAAGTCAACATGCGAGAGTGTATCTC
TATCCACGTCGGTCAAGCCGGAGTCCAGATTGGTAATGCCTGCTGGGAATTGTATTGCCT
AGAACACGGCATCCAACCCGATGGCCAGATGCCAAGTGACAAGACCATTGGAGGAGGGGA
CGACTCCTTCAACACCTTCTTCAGCGAGACTGGAGCTGGAAAGCACGTCCCAAGAGCCGT
TTTCGTCGATCTTGAACCAACTGTTGTCGATGAGGTCCGAACCGGTACTTACCGACAACT
CTTCCACCCGGAACAGTTGATTACCGGCAAAGAGGATGCCGCCAACAACTATGCCCGTGG
TCACTACACCATCGGTAAAGAAATCGTTGACCTTGTGCTCGACCGAATCCGCAAGTTGGC
GGATCAGTGCACTGGTCTCCAAGGTTTCCTCATCTTCCACTCCTTCGGAGGAGGCACCGG
GTCCGGTTTCACCTCTCTTCTCATGGAGAGACTTTCGGTCGATTACGGCAAAAAGTCCAA
ACTTGAGTTCGCCATTTACCCAGCTCCTCAGGTTTCAACCGCTGTTGTTGAGCCATACAA
CTCCATCCTTACCACTCACACCACCCTCGAGCACTCCGACTGTGCTTTCATGGTTGACAA
CGAGGCCATCTACGACATCTGCCGACGAAACTTGGACATTGAGCGCCCAACTTACACCAA
CTTGAACAGGTTGATGGGACAAATTGTGTCCTCCATCACCGCTTCGTTGAGATTCGATGG
TGCCCTTAACGTCGATCTTACTGAGTTCCAGACAAACTTGGTGCCATACCCACGTATCCA
TTTCCCTCTTGCCACCTACGCCCCTGTGATCTCGGCCGAGAAGGCTTACCACGAGCAACT
CTCCGTTGCCGAGATCACCAACGCTTGCTTCGAGCCAGCCAACCAGATGGTGAAATGCGA
CCCACGTCACGGAAAATACATGGCATGCTGCATGCTGTACCGTGGTGATGTTGTGCCAAA
AGATGTCAACGCCGCCATTGCAACCATCAAGACCAAGAGAACCATCCAATTCGTCGACTG
GTGCCCAACTGGTTTCAAGGTCGGTATCAACTACCAACCACCAACTGTTGTACCAGGTGG
TGACTTGGCCAAGGTTCAACGCGCCGTTTGCATGTTGAGCAACACCACCGCAATCGCTGA
GGCTTGGGCTCGCCTTGACCACAAGTTCGACTTGATGTACGCCAAGCGAGCTTTCGTGCA
TTGGTACGTCGGTGAGGGCATGGAAGAGGGAGAATTCTCCGAGGCCCGTGAGGATTTGGC
CGCTCTTGAGAAGGATTACGAAGAGGTTGGAGTCGACTCCGTTGAGGGCGAGGGAGAAGA
AGAAGGAGAGGAATATTAAACTCCTCTTTAATTACTCCCCATTAAATCAATGTCTGACAA
CATCTTCATTTACTTGGCGTTTTCTTGCTGTTTTATTTGTGCTACATTTCATTGAACGAT
AAAACACTCGAAATAAAATTGGGGAGACAAAGTTTTCATA
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-244] 4.58E-101 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-268] 1.4E-132 |
| PANTHER |
Tubulin (IPR000217) - T[2-447] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-213] 3.9E-68 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 1.1E-90 - T[53-72] 1.1E-90 - T[95-106] 1.1E-90 - T[108-132] 1.1E-90 - T[134-152] 1.1E-90 - T[153-174] 1.1E-90 - T[178-191] 1.1E-90 - T[192-212] 1.1E-90 - T[380-408] 1.1E-90 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[18-33] 4.7E-121 - T[45-58] 4.7E-121 - T[88-101] 4.7E-121 - T[120-128] 4.7E-121 - T[148-160] 4.7E-121 - T[161-172] 4.7E-121 - T[214-226] 4.7E-121 - T[274-289] 4.7E-121 - T[321-342] 4.7E-121 - T[347-360] 4.7E-121 - T[360-379] 4.7E-121 - T[385-401] 4.7E-121 - T[422-438] 4.7E-121 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[49-246] 4.2E-82 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[142-148] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[246-437] 4.88E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[248-393] 1.8E-60 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[263-391] 2.9E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[269-383] 7.6E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[384-450] 1.4E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 98.448 % | 938 | 0 |
| TBA1B_HUMAN | 98.004 % | 934 | 0 |
| TBA3C_HUMAN | 98.67 % | 928 | 0 |