- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.4322058-4332854.19785.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
R16 [4,330,145 / 4,332,271]
Amino acid sequence
Length: 443
>Cisavi.CG.ENS81.R16.4322058-4332854.19785.p
VPNFQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET
GAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVD
LCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDGA
LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP
RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
LEKDYEEVGVDSVEGEGEEEGEE
Nucleotide sequence
Length: 1,439
>Cisavi.CG.ENS81.R16.4322058-4332854.19785.t
GTTCCTAATTTTCAGCGAGAGTGTATCTCTATCCACGTCGGTCAAGCCGGAGTCCAGATT
GGTAATGCCTGCTGGGAATTGTATTGCCTAGAACACGGCATCCAACCCGATGGCCAGATG
CCAAGTGACAAGACCATTGGAGGAGGGGACGACTCCTTCAACACCTTCTTCAGCGAGACT
GGAGCTGGAAAGCACGTCCCAAGAGCCGTTTTCGTCGATCTTGAACCAACTGTTGTCGAT
GAGGTCCGAACCGGTACTTACCGACAACTCTTCCACCCGGAACAGTTGATTACCGGCAAA
GAGGATGCCGCCAACAACTATGCCCGTGGTCACTACACCATCGGTAAAGAAATCGTTGAC
CTTTGCACTGGTCTCCAAGGTTTCCTCATCTTCCACTCCTTCGGAGGAGGCACCGGGTCC
GGTTTCACCTCTCTTCTCATGGAGAGACTTTCGGTCGATTACGGCAAAAAGTCCAAACTT
GAGTTCGCCATTTACCCAGCTCCTCAGGTTTCAACCGCTGTTGTTGAGCCATACAACTCC
ATCCTTACCACTCACACCACCCTCGAGCACTCCGACTGTGCTTTCATGGTTGACAACGAG
GCCATCTACGACATCTGCCGACGAAACTTGGACATTGAGCGCCCAACTTACACCAACTTG
AACAGGTTGATGGGACAAATTGTGTCCTCCATCACCGCTTCGTTGAGATTCGATGGTGCC
CTTAACGTCGATCTTACTGAGTTCCAGACAAACTTGGTGCCATACCCACGTATCCATTTC
CCTCTTGCCACCTACGCCCCTGTGATCTCGGCCGAGAAGGCTTACCACGAGCAACTCTCC
GTTGCCGAGATCACCAACGCTTGCTTCGAGCCAGCCAACCAGATGGTGAAATGCGACCCA
CGTCACGGAAAATACATGGCATGCTGCATGCTGTACCGTGGTGATGTTGTGCCAAAAGAT
GTCAACGCCGCCATTGCAACCATCAAGACCAAGAGAACCATCCAATTCGTCGACTGGTGC
CCAACTGGTTTCAAGGTCGGTATCAACTACCAACCACCAACTGTTGTACCAGGTGGTGAC
TTGGCCAAGGTTCAACGCGCCGTTTGCATGTTGAGCAACACCACCGCAATCGCTGAGGCT
TGGGCTCGCCTTGACCACAAGTTCGACTTGATGTACGCCAAGCGAGCTTTCGTGCATTGG
TACGTCGGTGAGGGCATGGAAGAGGGAGAATTCTCCGAGGCCCGTGAGGATTTGGCCGCT
CTTGAGAAGGATTACGAAGAGGTTGGAGTCGACTCCGTTGAGGGCGAGGGAGAAGAAGAA
GGAGAGGAATATTAAACTCCTCTTTAATTACTCCCCATTAAATCAATGTCTGACAACATC
TTCATTTACTTGGCGTTTTCTTGCTGTTTTATTTGTGCTACATTTCATTGAACGATAAA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[5-261] 4.3E-121 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[6-237] 1.09E-92 |
| PANTHER |
Tubulin (IPR000217) - T[6-440] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[7-206] 3.6E-59 |
| PRINTS |
Tubulin (IPR000217) - T[14-34] 7.0E-60 - T[57-76] 7.0E-60 - T[146-167] 7.0E-60 - T[171-184] 7.0E-60 - T[185-205] 7.0E-60 - T[373-401] 7.0E-60 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[22-37] 3.1E-101 - T[49-62] 3.1E-101 - T[92-105] 3.1E-101 - T[207-219] 3.1E-101 - T[267-282] 3.1E-101 - T[314-335] 3.1E-101 - T[340-353] 3.1E-101 - T[353-372] 3.1E-101 - T[378-394] 3.1E-101 - T[415-431] 3.1E-101 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[53-239] 3.4E-71 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[135-141] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[239-430] 4.58E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[241-386] 1.8E-60 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[256-384] 2.8E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[262-376] 7.4E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[377-443] 1.3E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 95.991 % | 902 | 0 |
| TBA1B_HUMAN | 95.546 % | 900 | 0 |
| TBA3C_HUMAN | 96.437 % | 896 | 0 |