- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.5007579-5011081.20041.t
Possible name(s)
TBX2; TBX4; TBX6
Gene model
Location
R16 [5,007,578 / 5,011,081]
Amino acid sequence
Length: 513
>Cisavi.CG.ENS81.R16.5007579-5011081.20041.p
MERNSGVWRTEDILNLNSNSNMRNMSTVLAQRQEHTFTEISNAPHASSPYMSSNDRLHGY
SDSYISKFNPILGNEAIISVNEQHPPDFANAIPFQSSTQGTSQSPAEPNLQVELCDRELW
QEFSNVGTEMIVTKAGRRMFPGYRVKISGMDPNTQYCVLMDIVNVDEHRYKFQQGEWMVA
GKGELHAPQRMFLHSDSPATGSKWMTDIVSFYKIKLTNSINGRSTDKIVLNSMHRYQPRV
HIVRTDDVNTLHLQPMSTFAFPQTVFITVTAYQNSQVTKLKINNNPFAKGFRDNGGRTNK
NKKPSSDNQPDTTYERNLGKSSRESGAKDNEGSDQHNSKHLKLDSDTFNFTMYPNIDVPK
SVVSQPMLGDYRLNVSAASEANTALPFYPYPQHMYHYPTVHTNTVPHYAAINPPFNYQLN
PTTYYPHYPHPGYEPHLQQSYPQTLQTYSPVLTPPSDMTLAMRKKDTPPQKNPATSSPLK
VASPPTPHTIYSMLHANTSQRKHSSISTKPCDQ
Nucleotide sequence
Length: 1,539
>Cisavi.CG.ENS81.R16.5007579-5011081.20041.t
ATGGAAAGAAATTCGGGAGTGTGGAGGACTGAGGACATTTTAAACTTAAACTCAAACAGC
AATATGAGAAATATGTCAACTGTTTTAGCTCAAAGACAAGAGCATACGTTTACAGAAATA
TCCAATGCCCCACACGCAAGTAGTCCATACATGTCTTCCAATGACCGTTTGCATGGGTAT
TCTGATTCGTACATTTCAAAGTTTAATCCAATTCTTGGGAACGAAGCTATCATATCAGTT
AACGAACAGCACCCGCCGGACTTCGCAAACGCAATTCCATTCCAAAGTTCGACGCAGGGT
ACGAGCCAAAGTCCTGCGGAACCGAATCTGCAAGTTGAACTGTGCGACCGGGAATTGTGG
CAAGAGTTTTCAAACGTCGGCACTGAGATGATTGTCACAAAAGCTGGAAGACGAATGTTC
CCTGGTTACCGTGTAAAAATATCCGGAATGGATCCGAACACTCAGTATTGCGTATTGATG
GATATAGTCAACGTGGACGAGCATAGATATAAGTTTCAGCAAGGAGAATGGATGGTGGCG
GGAAAGGGCGAGCTGCATGCCCCGCAGAGAATGTTTCTTCACTCCGATAGTCCGGCAACA
GGCAGCAAATGGATGACCGACATTGTTTCTTTCTACAAGATCAAACTGACGAATTCTATA
AACGGAAGGTCGACGGATAAGATTGTTCTCAACTCAATGCATCGATATCAACCTCGTGTC
CATATTGTTCGAACTGATGACGTCAATACGTTACATCTTCAACCGATGTCAACTTTCGCT
TTCCCACAAACTGTGTTTATAACAGTTACCGCTTATCAGAACTCTCAGGTGACAAAGCTT
AAGATAAACAACAATCCATTTGCGAAAGGATTTCGTGATAACGGCGGAAGAACGAACAAA
AATAAAAAGCCGTCATCGGACAACCAGCCGGACACCACCTATGAAAGAAACCTCGGTAAA
TCGTCAAGAGAGAGTGGTGCAAAAGATAATGAAGGTTCTGACCAACATAATTCGAAACAT
TTGAAATTAGACAGCGACACTTTTAATTTCACAATGTATCCCAACATTGACGTCCCCAAA
AGCGTTGTCAGCCAACCTATGCTTGGAGATTACAGACTCAACGTATCAGCAGCATCCGAA
GCTAATACTGCTCTCCCGTTCTATCCCTATCCACAACATATGTACCACTACCCGACTGTG
CATACAAACACTGTACCTCATTACGCTGCTATAAACCCTCCGTTCAACTATCAATTAAAC
CCGACAACCTATTACCCTCATTACCCTCATCCTGGGTACGAACCACATTTACAGCAGAGC
TACCCGCAAACGTTGCAAACTTATTCACCGGTATTAACACCTCCGTCTGATATGACTCTT
GCAATGCGTAAAAAGGACACACCTCCACAAAAAAACCCTGCAACTTCTAGTCCACTGAAA
GTCGCTTCACCCCCCACCCCACATACCATATACTCAATGTTGCACGCAAACACTTCTCAG
AGAAAACATTCGTCAATTTCCACGAAACCATGTGACCAA
| PANTHER |
TF_T-box (IPR001699) - T[22-508] 3.2E-127 |
| Gene3D |
T-box_sf (IPR036960) - T[107-299] 1.4E-84 |
| CDD |
TF_T-box (IPR001699) - T[109-297] 2.24258E-112 |
| SMART |
TF_T-box (IPR001699) - T[109-298] 9.7E-116 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[110-293] 8.08E-74 |
| Pfam |
TF_T-box (IPR001699) - T[112-293] 4.2E-78 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[114-293] 71.709 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[119-138] . |
| PRINTS |
TF_T-box (IPR001699) - T[127-151] 1.7E-41 - T[192-205] 1.7E-41 - T[209-218] 1.7E-41 - T[229-243] 1.7E-41 - T[264-277] 1.7E-41 - T[285-293] 1.7E-41 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 51.282 % | 229 | 9.09E-70 |
| TBX2_HUMAN | 54.315 % | 237 | 4.36E-70 |
| TBX4_HUMAN | 55.319 % | 228 | 2.5E-68 |