- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.5012720-5014970.20043.t
Possible name(s)
TBX2; TBX3; TBX6
Gene model
Location
R16 [5,012,811 / 5,014,970]
Amino acid sequence
Length: 558
>Cisavi.CG.ENS81.R16.5012720-5014970.20043.p
MANALPLSWQNEYEHDSQSMINNFHLPFSEPEYSAPKENHASTWQIEDNFLQQPNPAKYH
EATYQTPSNTSQAPRVQQPPSFHSVPSNNPQVVRSPLDPHVQVHLHDLQLWDSFSAAQTE
MIVTKTGRRMFPGYRVKMSGMDPNAQYCVLMDISSVDENRYKFQHGEWVIAGRGEPHIPQ
RFYLHPNSPCTGQQWMKDIVSFHKVKLTNSCGNSADGKFLIHSMHRYQPRLHIVRTDDVS
TLHLQPMSTFIFPQTMFVTVTAYQNHEVTKLKINNNPFARGFRSNGGKTRNMLAQNQCEL
QIVEPSQPLEFSRKRIHQSQLGDDLAQMTKRWHGNSMYQPSFDSSPQPSWSSYQSLPAQL
HYNTISPTMPLNEICYNQPTTQYYQQYVESPTIQLEPNHNAHFDLRPTQLNFEESPEIST
HPESHSSQGSPYQQSMIATSSPTADEQVFNETTAGGTMVSFTPVENSIAHIQNPSGGVQV
VDSFRSPLASTDEGYISTSLSNPDEEAKPTHDVLSTLNDILPTHTSPNSMVRLDSLSAEI
PTEINCSYNILSSHSPIY
Nucleotide sequence
Length: 1,677
>Cisavi.CG.ENS81.R16.5012720-5014970.20043.t
ATGGCGAACGCACTACCTTTATCGTGGCAAAATGAGTACGAGCACGATAGTCAGTCAATG
ATTAATAACTTCCACCTACCGTTCAGTGAGCCAGAATATTCTGCTCCGAAGGAGAACCAT
GCAAGTACGTGGCAAATTGAAGACAACTTTTTGCAACAGCCAAACCCTGCGAAATACCAC
GAAGCTACGTACCAAACTCCATCGAATACATCTCAAGCTCCACGAGTACAGCAACCACCA
AGTTTTCATTCAGTCCCTTCAAACAATCCACAGGTAGTTCGCTCACCACTTGATCCGCAT
GTACAAGTTCATCTTCACGATCTGCAGTTATGGGACAGTTTCTCAGCCGCGCAAACTGAA
ATGATCGTCACCAAAACCGGAAGGCGAATGTTCCCTGGTTACCGAGTTAAAATGTCCGGG
ATGGACCCGAACGCTCAGTATTGCGTATTGATGGACATTTCGAGTGTGGATGAAAACAGA
TACAAGTTTCAACACGGGGAGTGGGTGATAGCTGGTCGTGGAGAACCACATATCCCACAA
AGATTTTATTTGCACCCGAACTCACCTTGTACCGGACAACAATGGATGAAAGATATCGTT
TCTTTCCACAAAGTTAAATTAACAAACTCTTGTGGAAATTCAGCAGATGGAAAGTTCCTC
ATACATTCCATGCATCGATATCAACCTCGTCTTCATATTGTTCGAACTGATGACGTCAGC
ACATTACACCTTCAACCGATGTCAACATTTATTTTCCCGCAAACAATGTTCGTCACTGTC
ACTGCTTACCAAAATCACGAGGTCACAAAGTTAAAGATCAACAACAATCCATTCGCTCGT
GGATTTCGTTCAAATGGAGGCAAAACTAGAAACATGTTGGCCCAGAATCAGTGCGAACTT
CAAATAGTCGAACCAAGTCAGCCCCTCGAGTTTTCCAGAAAACGGATTCACCAATCTCAA
CTCGGAGATGACCTTGCACAAATGACAAAGCGCTGGCACGGTAACTCGATGTACCAACCG
AGCTTCGATAGCTCTCCACAGCCATCTTGGTCATCATACCAAAGTCTCCCAGCTCAACTG
CACTACAACACCATCTCGCCCACCATGCCGCTTAACGAGATTTGCTACAATCAACCAACC
ACGCAATACTATCAACAATACGTTGAATCTCCAACTATCCAACTAGAACCAAATCACAAC
GCACACTTTGATCTGAGACCGACACAACTTAATTTTGAGGAATCGCCAGAGATTTCCACT
CACCCTGAAAGTCACTCCAGTCAGGGTTCTCCGTATCAGCAAAGTATGATTGCCACCAGC
TCGCCTACCGCTGATGAACAAGTTTTTAATGAAACAACAGCGGGGGGCACGATGGTAAGC
TTTACACCAGTAGAAAATTCAATCGCACATATTCAAAATCCTAGTGGAGGTGTTCAAGTT
GTAGATAGTTTTCGATCGCCGCTCGCGTCAACAGACGAAGGATACATATCGACCTCGCTG
AGCAATCCTGACGAGGAAGCCAAACCCACGCACGACGTGCTTTCTACCCTAAACGACATT
TTGCCAACTCACACTTCTCCAAATAGCATGGTGCGCTTGGATTCGCTGTCCGCCGAAATA
CCAACAGAAATCAACTGTTCGTATAACATATTATCGTCACATAGCCCCATCTACTAA
| PANTHER |
TF_T-box (IPR001699) - T[1-552] 6.8E-152 |
| Gene3D |
T-box_sf (IPR036960) - T[98-290] 3.9E-81 |
| SMART |
TF_T-box (IPR001699) - T[100-289] 6.3E-103 |
| CDD |
TF_T-box (IPR001699) - T[101-286] 1.55158E-105 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[101-284] 1.99E-72 |
| Pfam |
TF_T-box (IPR001699) - T[103-283] 1.4E-74 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[105-284] 70.881 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[110-129] . - T[184-202] . |
| PRINTS |
TF_T-box (IPR001699) - T[118-142] 1.8E-39 - T[183-196] 1.8E-39 - T[200-209] 1.8E-39 - T[220-234] 1.8E-39 - T[255-268] 1.8E-39 - T[276-284] 1.8E-39 |
| PRINTS |
TF_Brachyury (IPR002070) - T[163-183] 2.5E-5 - T[225-242] 2.5E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 48.325 % | 221 | 3.03E-66 |
| TBX2_HUMAN | 49.485 % | 228 | 2.39E-66 |
| TBX3_HUMAN | 46.119 % | 226 | 1.5E-65 |