- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.5018621-5019414.20049.t
Possible name(s)
TBX2; TBX3; TBX6
Gene model
Location
R16 [5,018,620 / 5,019,414]
Amino acid sequence
Length: 191
>Cisavi.CG.ENS81.R16.5018621-5019414.20049.p
MSPRYRPQVHLHDVQLWDSFSAAQTEMIVTKTGRRMFPGYRVKMSGMDPNAQYCVLMDIS
SVDKNRYKFQHGKWVIAGRGEPHIPQRFYLHPNSPCTGQQWMKDIVSFHKVKLTNSCGNC
GDGKFLVHSMHRYQPRVHIVRTDDVNTLHLQPMSTFAFPQTFFTTVTAYQNGKIAKLKIS
NNPYARGFRED
Nucleotide sequence
Length: 624
>Cisavi.CG.ENS81.R16.5018621-5019414.20049.t
CTAGAACATTGAAAGAAGAGGATGATTATTGCAAATTTAAACCGTCAAGAGATGAGCCCA
CGATACCGACCGCAAGTTCATCTTCACGATGTTCAGTTATGGGACAGTTTCTCAGCTGCT
CAGACTGAAATGATCGTCACTAAAACCGGAAGGCGAATGTTCCCTGGTTACCGAGTTAAA
ATGTCCGGGATGGACCCGAACGCTCAGTATTGCGTATTGATGGACATTTCGAGTGTGGAT
AAAAACAGATACAAGTTTCAACACGGGAAGTGGGTGATAGCTGGTCGTGGAGAACCACAT
ATCCCACAAAGATTTTATTTGCACCCGAACTCACCTTGTACCGGACAACAATGGATGAAA
GATATCGTTTCTTTCCACAAAGTTAAATTAACCAACTCTTGTGGGAATTGTGGAGACGGA
AAGTTCCTCGTACATTCCATGCATCGATATCAACCTCGTGTCCACATTGTTCGAACTGAT
GACGTCAATACGTTACATCTTCAGCCGATGTCAACTTTCGCTTTCCCACAAACTTTCTTT
ACAACGGTCACAGCATACCAGAACGGAAAGATCGCTAAGTTAAAGATATCCAACAACCCT
TACGCCCGAGGCTTCCGAGAAGAC
| Gene3D |
T-box_sf (IPR036960) - T[4-191] 4.6E-80 |
| SMART |
TF_T-box (IPR001699) - T[6-191] 6.9E-98 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[7-190] 4.47E-72 |
| PANTHER |
TF_T-box (IPR001699) - T[7-190] 1.3E-117 |
| CDD |
TF_T-box (IPR001699) - T[7-191] 1.35935E-106 |
| Pfam |
TF_T-box (IPR001699) - T[9-190] 1.2E-73 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[11-190] 68.9 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[16-35] . - T[90-108] . |
| PRINTS |
TF_T-box (IPR001699) - T[24-48] 2.0E-40 - T[89-102] 2.0E-40 - T[106-115] 2.0E-40 - T[126-140] 2.0E-40 - T[161-174] 2.0E-40 - T[182-190] 2.0E-40 |
| PRINTS |
TF_Brachyury (IPR002070) - T[69-89] 1.1E-5 - T[131-148] 1.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 50 % | 207 | 7.06E-66 |
| TBX2_HUMAN | 51.087 % | 211 | 4.86E-65 |
| TBX3_HUMAN | 47.525 % | 209 | 9.73E-64 |