- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.5028490-5042129.20052.t
Possible name(s)
TBX2; TBX4; TBX6
Gene model
Location
R16 [5,028,489 / 5,042,129]
Amino acid sequence
Length: 167
>Cisavi.CG.ENS81.R16.5028490-5042129.20052.p
MNIANSNHQEMSSRYGPQVHLHDVQLWDSFSAAQTEMIITKTGRRMFPGYRVKMSGMDPN
AQYCVLMDISSVDENRYKFQHGEWVIAGRGEPHIPQRFYLHPNSPCTGQQWMKDIVSFHK
VKLTNSCGNCGDGKFLVHSMHRYQPRVHIVRTDDVNTLHLQPMSTFA
Nucleotide sequence
Length: 524
>Cisavi.CG.ENS81.R16.5028490-5042129.20052.t
CTAGAACATTGAAAGAAGAGGATGAATATTGCAAATTCAAACCATCAAGAGATGAGCTCA
CGATACGGACCGCAAGTTCATCTTCACGATGTTCAGTTATGGGACAGTTTCTCAGCTGCT
CAGACTGAAATGATTATCACCAAAACCGGAAGGCGAATGTTCCCTGGTTACCGAGTTAAA
ATGTCCGGGATGGACCCGAACGCTCAGTATTGCGTATTGATGGACATTTCGAGTGTGGAT
GAAAACAGATACAAGTTTCAACACGGGGAGTGGGTGATAGCTGGTCGTGGAGAACCACAT
ATCCCACAAAGATTTTATTTGCACCCGAACTCACCTTGTACCGGACAACAATGGATGAAA
GATATCGTTTCTTTCCACAAAGTTAAATTAACCAACTCTTGTGGAAATTGTGGAGACGGA
AAGTTCCTCGTACATTCCATGCATCGATATCAACCTCGTGTCCACATTGTTCGAACTGAT
GACGTCAATACGTTACATCTTCAACCGATGTCAACTTTCGCTTT
| PANTHER |
TF_T-box (IPR001699) - T[6-167] 4.9E-100 |
| Gene3D |
T-box_sf (IPR036960) - T[14-167] 1.1E-59 |
| SMART |
TF_T-box (IPR001699) - T[16-166] 1.8E-57 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[17-166] 1.74E-55 |
| Pfam |
TF_T-box (IPR001699) - T[19-166] 2.4E-53 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[21-167] 51.895 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[26-45] . - T[100-118] . |
| PRINTS |
TF_T-box (IPR001699) - T[34-58] 8.0E-30 - T[99-112] 8.0E-30 - T[116-125] 8.0E-30 - T[136-150] 8.0E-30 |
| PRINTS |
TF_Brachyury (IPR002070) - T[79-99] 2.4E-6 - T[141-158] 2.4E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 46.626 % | 163 | 4.24E-49 |
| TBX2_HUMAN | 50.667 % | 170 | 3.91E-50 |
| TBX4_HUMAN | 51.748 % | 165 | 5.76E-49 |