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TRANSCRIPT CARD

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  1. Region 'REG00001296' > 
  2. Transcript 'Cisavi.CG.ENS81.R16....' > 
  3. Transcript 'Moocci.CG.ELv1_2.S14...' > 
  4. Region 'REG00001297' > 
  5. Transcript 'Cisavi.CG.ENS81.R16....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R16.5041500-5055627.20059.t

Possible name(s)

TBX2; TBX3; TBX6

Gene model

Cisavi.CG.ENS81.R16.5041500-5055627

Location

R16 [5,045,368 / 5,046,172]

Sequences

Amino acid sequence

Length: 191

>Cisavi.CG.ENS81.R16.5041500-5055627.20059.p
MSSRYGPKVHLHDVQLWDSFSAAQTEMIITKTGRRMFPGYRVKMSGMDPNAQYCVLMDIS
SVDENRYKFQHGEWVIAGSGEPHIPQRYYLHPNSPCTGQQWMKDIVSFHKVKLTNSCGNF
GDGKFLVHSMHRYQPRVHIVRTDDVNTLHLQPMSTFAFPQTFFTTVTAYQNGKIAKLKIS
NNPYARGFRED

Nucleotide sequence

Length: 633

>Cisavi.CG.ENS81.R16.5041500-5055627.20059.t
ACAAAGATTCTAGAACATTGAAAGAAGAGGATGAATATTGCAAATTCAAACCATCAAGAG
ATGAGCTCACGATACGGACCGAAAGTTCATCTTCACGATGTTCAGTTATGGGACAGTTTC
TCAGCTGCTCAGACCGAAATGATTATTACTAAAACCGGAAGGCGAATGTTCCCTGGTTAC
CGAGTTAAAATGTCCGGGATGGACCCAAACGCTCAGTATTGCGTATTGATGGACATTTCG
AGTGTGGATGAAAACAGATACAAGTTTCAACACGGGGAGTGGGTGATAGCTGGTAGTGGA
GAACCACATATCCCACAAAGATATTATTTGCATCCGAACTCACCTTGTACCGGACAACAA
TGGATGAAAGATATCGTTTCTTTCCACAAAGTTAAATTAACCAACTCTTGTGGGAATTTT
GGAGACGGAAAGTTCCTCGTACATTCCATGCATCGATATCAACCTCGTGTCCACATTGTT
CGAACTGATGACGTCAATACGTTACATCTTCAGCCGATGTCAACTTTCGCTTTCCCACAA
ACTTTCTTCACAACGGTCACCGCATACCAGAACGGAAAGATCGCTAAGTTAAAGATATCC
AACAACCCTTACGCCCGAGGCTTCCGAGAAGAC

InterProScan

Gene3D
T-box_sf (IPR036960) - T[4-191] 1.5E-79
SMART
TF_T-box (IPR001699) - T[6-191] 6.4E-100
PANTHER
TF_T-box (IPR001699) - T[6-190] 2.5E-118
CDD
TF_T-box (IPR001699) - T[6-191] 5.53508E-108
SUPERFAMILY
p53-like_TF_DNA-bd (IPR008967) - T[7-190] 4.72E-72
Pfam
TF_T-box (IPR001699) - T[9-190] 1.5E-73
ProSiteProfiles
TF_T-box (IPR001699) - T[11-190] 68.5
ProSitePatterns
TF_T-box_CS (IPR018186) - T[16-35] . - T[90-108] .
PRINTS
TF_T-box (IPR001699) - T[24-48] 2.0E-40 - T[89-102] 2.0E-40 - T[106-115] 2.0E-40 - T[126-140] 2.0E-40 - T[161-174] 2.0E-40 - T[182-190] 2.0E-40
PRINTS
TF_Brachyury (IPR002070) - T[69-89] 5.5E-6 - T[131-148] 5.5E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TBX6_HUMAN 50.538 % 206 2.16E-65
TBX2_HUMAN 52.174 % 213 1.07E-65
TBX3_HUMAN 48.515 % 211 8.22E-65