- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.5054675-5055290.20060.t
Possible name(s)
TBX2; TBX3; TBX4
Gene model
Location
R16 [5,054,674 / 5,055,290]
Amino acid sequence
Length: 167
>Cisavi.CG.ENS81.R16.5054675-5055290.20060.p
MNIPNSNHQEMSSRYRPQVHLHDVQLWDSFSAAQTEMIITKTGRRMFPGYRVKISGMDPN
AQYCVLMDISSVDENRYKFQHGEWVIAGRGESHIPQRFYLHPNSPCTGQQWMKDIVSFHK
VKLTNSCGNCGGEKFLVHSMHRYQPRVHIVRTDDVSTLHLQPMSIFV
Nucleotide sequence
Length: 524
>Cisavi.CG.ENS81.R16.5054675-5055290.20060.t
CTAGAACATTGAAAGAAGAGGATGAATATTCCAAATTCAAACCATCAAGAGATGAGCTCA
CGATACAGACCGCAAGTTCATCTTCACGATGTTCAGTTATGGGACAGTTTCTCAGCTGCT
CAGACTGAAATGATTATTACTAAAACCGGAAGGCGAATGTTCCCTGGTTACCGAGTTAAA
ATATCCGGGATGGACCCGAACGCTCAGTATTGCGTATTGATGGACATTTCGAGTGTGGAT
GAAAACAGATACAAGTTTCAACACGGGGAGTGGGTGATAGCTGGTCGTGGAGAATCACAT
ATCCCACAAAGATTTTATTTGCACCCGAACTCACCTTGTACCGGTCAACAATGGATGAAA
GATATCGTTTCTTTCCACAAAGTTAAATTAACCAACTCTTGTGGGAATTGTGGAGGCGAA
AAGTTCCTCGTACATTCCATGCATCGATATCAACCTCGTGTCCACATTGTTCGAACTGAT
GACGTCAGCACATTACACCTCCAACCGATGTCAATTTTTGTTTT
| PANTHER |
TF_T-box (IPR001699) - T[6-166] 1.1E-96 |
| Gene3D |
T-box_sf (IPR036960) - T[14-167] 9.8E-59 |
| SMART |
TF_T-box (IPR001699) - T[16-167] 7.0E-58 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[17-165] 2.36E-54 |
| Pfam |
TF_T-box (IPR001699) - T[19-159] 9.2E-53 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[21-167] 51.363 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[26-45] . - T[100-118] . |
| PRINTS |
TF_T-box (IPR001699) - T[34-58] 3.6E-30 - T[99-112] 3.6E-30 - T[116-125] 3.6E-30 - T[136-150] 3.6E-30 |
| PRINTS |
TF_Brachyury (IPR002070) - T[79-99] 2.4E-5 - T[141-158] 2.4E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX2_HUMAN | 50 % | 167 | 9.01E-49 |
| TBX3_HUMAN | 45.238 % | 163 | 1.68E-47 |
| TBX4_HUMAN | 51.095 % | 161 | 1.31E-47 |