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  1. Clone 'cien156471' > 
  2. Transcript 'Cisavi.CG.ENS81.R17....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R17.1110395-1112520.11744.t

Possible name(s)

DLX3; MSX1; MSX2

Gene model

Cisavi.CG.ENS81.R17.1110395-1112520

Location

R17 [1,110,394 / 1,112,520]

Sequences

Amino acid sequence

Length: 317

>Cisavi.CG.ENS81.R17.1110395-1112520.11744.p
LAVTENEAGPMSDSEALVTSSVTKSPKIKNNGSDTTLSPNDAITPAKKEKSPKKEKLNFS
IEFLLSKPERKVSNTTTPCDLSQQKVKPYFASYFASYTPNVDPFYLWGKSQSPPKHNIDY
PATPSKDASPTRSDVTDTDDLNFEQNSPKSNDVMHTSPNAFRLSKCTLRKHKPNRKPRTP
FSTDQLLSLERRFQEKQYLSIAERAEFSAALSLSETQVKIWFQNRRAKAKRLHEAEFEKV
KLAAAAAAYGDMMQPSSKQHNVYPGFVGISSDTQMRLGQSASIARSLPASHFSAFSNFTQ
PRGPRQATISYYPTDSR

Nucleotide sequence

Length: 954

>Cisavi.CG.ENS81.R17.1110395-1112520.11744.t
CTCGCAGTTACCGAAAACGAAGCAGGTCCGATGTCCGATTCCGAAGCACTAGTGACGTCA
TCAGTTACAAAATCGCCGAAAATAAAAAATAATGGCAGTGATACCACCCTAAGTCCTAAT
GACGCTATTACTCCTGCCAAGAAAGAGAAAAGTCCTAAAAAGGAGAAATTGAATTTTAGT
ATTGAGTTCCTGCTTTCAAAGCCCGAACGCAAAGTTTCCAACACCACGACCCCGTGCGAT
CTATCTCAACAAAAAGTCAAGCCTTATTTTGCGAGTTACTTCGCGAGTTACACCCCGAAT
GTGGATCCGTTTTATTTATGGGGAAAGTCCCAATCGCCCCCGAAACACAACATCGACTAT
CCAGCTACTCCATCAAAGGATGCGTCACCGACGAGGTCTGACGTAACGGATACAGACGAT
TTAAATTTTGAGCAGAATTCCCCGAAATCGAATGACGTAATGCACACCTCGCCGAACGCA
TTTCGTTTGTCGAAATGTACTCTTCGAAAACACAAGCCGAATCGCAAACCACGAACACCC
TTCAGCACAGATCAATTGTTATCACTCGAACGGCGGTTTCAAGAGAAGCAATATCTTTCC
ATAGCCGAGCGCGCCGAATTCTCCGCCGCTCTATCGTTGTCTGAAACTCAGGTTAAAATC
TGGTTTCAAAACCGAAGAGCCAAAGCGAAGCGTCTTCACGAAGCTGAATTTGAGAAAGTT
AAATTGGCTGCAGCCGCCGCAGCATATGGCGACATGATGCAACCGAGTTCCAAGCAGCAC
AACGTTTACCCCGGTTTCGTGGGGATTTCCTCCGACACCCAAATGCGATTGGGTCAGTCG
GCGTCCATCGCAAGGTCCCTACCAGCTTCGCATTTTTCGGCGTTTTCGAATTTTACTCAA
CCCCGCGGGCCGAGGCAAGCCACCATATCCTACTACCCGACCGATAGCAGATAG

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[170-236] 8.98E-23
ProSiteProfiles
Homeobox_dom (IPR001356) - T[172-232] 20.293
SMART
Homeobox_dom (IPR001356) - T[174-236] 7.1E-25
CDD
Homeobox_dom (IPR001356) - T[175-233] 1.691E-21
Pfam
Homeobox_dom (IPR001356) - T[175-231] 6.1E-21
PRINTS
Homeobox_metazoa (IPR020479) - T[196-207] 3.9E-6 - T[211-221] 3.9E-6 - T[221-230] 3.9E-6
ProSitePatterns
Homeobox_CS (IPR017970) - T[207-230] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DLX3_HUMAN 61.667 % 85.1 5.4E-19
MSX1_HUMAN 78.652 % 143 1.57E-40
MSX2_HUMAN 74.444 % 140 8.77E-40