- Transcript 'Cisavi.CG.ENS81.R17....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R17.16158-22050.04876.t
Possible name(s)
EXOSC7; EXOSC8; EXOSC9
Gene model
Location
R17 [16,157 / 22,050]
Amino acid sequence
Length: 392
>Cisavi.CG.ENS81.R17.16158-22050.04876.p
MPLRDVAFSKREQQFLLQALASNIRVDDRVAVDYRDVSIHFGLDQGCCTVHMGRTKTLAQ
VTAELTKPKENRPSEGYLGIQIEMSTMAAPNFDPAKQGEIGAGLQQMLERSIIMSRAIDL
EELCVRVGEKAWHIQVYIHVLSHDGNILDCACIAAVAALKQFKRPDVSVIGKEFTVHTLE
EKNPLYLTMHHMPFCASFAFFQGGEYMVMDPTLNEERVMDGKLMLAVNNHKEVCCLQMSG
ELQINKEKILTCTNMACVKAQKFSDLVIKSIENDREKRKLGAIRSSTTTSFSKKLEMMQK
HTIKTVLPSTKGQNNVQSDDRSFTDYPTPQIPDKTASWLTQHDPNTASIGKGLVNTWSRE
SQMLIKAFRPQQEESDSDSDNSEEEEVMFVLG
Nucleotide sequence
Length: 1,207
>Cisavi.CG.ENS81.R17.16158-22050.04876.t
GTTTAAATTTTACCGTCAACAAATCCAAAATGCCACTGCGTGATGTTGCATTTTCAAAAC
GTGAACAACAATTTCTTCTTCAAGCGCTTGCCAGTAATATTAGAGTGGATGACCGGGTTG
CAGTTGATTATCGAGATGTAAGTATACACTTTGGACTGGACCAAGGTTGTTGTACAGTAC
ACATGGGAAGAACTAAAACACTTGCTCAAGTGACTGCCGAATTGACAAAACCAAAGGAGA
ACCGGCCAAGTGAGGGATATTTAGGAATACAAATTGAAATGTCGACAATGGCAGCACCAA
ACTTTGACCCTGCTAAACAAGGTGAAATAGGAGCAGGACTTCAACAAATGTTAGAACGTT
CTATCATTATGTCACGTGCCATTGATTTAGAGGAACTGTGTGTTCGTGTTGGGGAAAAAG
CTTGGCACATTCAGGTTTACATCCATGTTTTATCACATGATGGGAACATATTGGATTGTG
CATGTATAGCAGCAGTGGCGGCACTCAAGCAATTTAAACGTCCGGATGTGTCTGTCATAG
GAAAGGAATTTACAGTGCATACATTGGAGGAGAAAAACCCACTTTATTTGACAATGCACC
ACATGCCTTTCTGTGCTTCATTTGCGTTTTTTCAAGGTGGTGAATACATGGTAATGGACC
CGACTTTAAACGAAGAAAGGGTTATGGATGGTAAATTAATGCTGGCCGTTAATAATCACA
AGGAAGTTTGTTGCCTTCAAATGAGTGGCGAGCTCCAAATTAATAAAGAAAAGATTTTGA
CTTGCACTAATATGGCTTGTGTGAAAGCTCAAAAATTCTCTGATTTGGTGATCAAAAGTA
TTGAAAATGACCGGGAGAAAAGGAAATTGGGAGCCATCAGATCATCAACTACAACAAGCT
TTTCGAAAAAATTGGAAATGATGCAAAAACACACAATCAAGACCGTACTACCTTCCACAA
AAGGACAAAACAACGTACAATCCGACGATAGAAGTTTCACTGACTACCCAACCCCACAAA
TACCGGACAAAACAGCTAGCTGGCTTACTCAACACGACCCAAACACTGCCAGTATTGGCA
AAGGTCTTGTTAATACGTGGTCTCGTGAATCGCAAATGTTAATTAAAGCATTTAGGCCGC
AGCAAGAGGAAAGTGACTCAGACAGTGACAATTCCGAGGAAGAGGAAGTGATGTTTGTTT
TGGGCTA
| SUPERFAMILY |
Ribosomal_S5_D2-typ_fold (IPR020568) - T[4-170] 6.07E-47 - T[203-217] 6.07E-47 |
| Gene3D |
PNPase/RNase_PH_dom_sf (IPR027408) - T[6-304] 2.5E-86 |
| CDD |
Rrp45 (IPR033100) - T[9-266] 1.92373E-135 |
| Pfam |
ExoRNase_PH_dom1 (IPR001247) - T[34-165] 2.2E-18 |
| SUPERFAMILY |
ExoRNase_PH_dom2_sf (IPR036345) - T[187-281] 3.02E-28 |
| Pfam |
ExoRNase_PH_dom2 (IPR015847) - T[191-256] 5.3E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EXOS7_HUMAN | 28.175 % | 102 | 5.78E-25 |
| EXOS8_HUMAN | 27.925 % | 115 | 1.52E-29 |
| EXOS9_HUMAN | 41.873 % | 289 | 2.16E-94 |