- Transcript 'Cisavi.CG.ENS81.R17....' >
- Transcript 'KH2012:KH.C8.71.v1.A...' >
- Clone 'cima822050' >
- Clone 'cign033o12' >
- Transcript 'Cisavi.CG.ENS81.R17....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R17.1741144-1785194.16426.t
Possible name(s)
DCHS1; DCHS2; FAT4
Gene model
Location
R17 [1,742,494 / 1,785,122]
Amino acid sequence
Length: 2,299
>Cisavi.CG.ENS81.R17.1741144-1785194.16426.p
DFNVLENATIGTEIGRLDTTEQNGYYITSEDSNPFMQYFDRGVVENQGIIKTIKKLDHET
FSSFDIAVYDSVLNRYFEVRIDVTDINDHAPEFRVSQLNLTISEASQIGAKYNLGTAVDP
DSDPFNVQGYTIISGNEDKAFRLNNRHINGQIYVDLIVNQTLNRELVSNYSFTVEAFDGD
VPPKTGQLDVYIDISDVNDNPPVFDFSRYTVRLSENEPVGRDVITLNATDQDIGQNAMLT
YRIDRSQSDPGFIFEIESNSGRIYLNKKLDFEQVVQHKLVVEARDEGSEPQVGSTVVIVE
VTDVNDNEPQINVIFLDAGEAKVSEGAEPGDYIARVSVSDQDLGELSQVNVSLEGGNGRF
GLQTENNIIYLVCVKLKLDRETESLYHITLNAVDFGSPPQSATTSFTITVEDINDNPPRF
PSDLIEIELSQSAFPGTFVTQLQSTDADIGRNAEVTYRLDGSPQSLWLNINPHSGLITTA
RSLDSLTSPELQVTVWATDGGTPALASNATLVIRLSDAVNSPPRFQSSSYAVSVPEDAAV
GHCFLKVHATDPDSSVISYSFVIGSLQDPPTNFQVNSSSGDVCVTSSLNRETTASYDLQI
QATDQGGQWDRAPLVITIEDVNDNKPVFSPVSYVINVDRNADVGTPITKLTATDADDVTG
SGYGRVTFVMTSGNDEALFALDTETGRISVAKPLTTNGVGSMYEIDVAAVDGGGLSSDVD
ASVVISIVDGSSTGGPVFTQARYFFQASEADPKETLLGTISATANDGRAVTYFIRHDPPH
STWFSVRPTGDVIVRSPMDREIFPSITFQVIASSGSPPIFGFAMVTVTISDVNDNPPHFI
SSSAGRLEPIIIPFSSLVGATLHSVVAIDNDEGRNGQVKYRLQSDFFSIDSNTGVILLTS
ALPHQATNYSVTIEAYDQGQSPHVTSVELIIRTIQPDPNCPVFPEDFRFSVAEDTALSKR
YFSSIHASTTNSTAKIAYYLQSSSSAFIFSIFSNGSLYLIRGLDYETQDTYSFEVEKRES
FDISRIISAQINLRDVNDHTPRFNSGSMIFGVEENTRIGEEVYRFRAVDPDSGLSGRLTY
SLVSQTPASVFRINSDTGALFVDSGIDREAVDQYILVVTDRSPTSPRFSTASARVIVRDV
NDNSPRFVGHHMTYVAEDEPIGYPAMRLAAEDADAGVNGRVMYAIESVTSDLGNSAEEMS
YFHIDSNTGVITVAKQLDFERSKTHSINVSASDLATNQRTTHQMITIHLMDVNDVTPHFE
RTTYQAEVMEGQIAGTIVTKVTALDEDSGENGLLTYQLQASSESAAFVIDPNNEVISLAM
ELDRENKSSYRLTVFAQDSAFPSLYDWCFVLVTVVDVNDNAPQFSPLDGSIVPPLLSRLE
IPEHIEGPQVVHTIAARDADIGENGQITYAISGEHNDISDFSINPSTGELSITRRLDREL
TGLYQLQVTASDNIHTTSGQIEVTVLDWNDNDPQFVAASYNGQVAEGLSRGQYVLTVRAT
DADIGLNGEISYFLSNTTGLDGKFTVDTMTGVVTTTAPLDREEKGSYNFLVEAVDAAPYG
PRSSTVPVSITGRIRGTYFLPNYNPVLRYTHVITRPAPALMTTMISYLFFIFAIFTVFGN
ESMNQTVFEIDRIHGNIRTREAIPSNFPNRSSLIILASDGGNPPMRASAVIEINLDGDNM
VYQLNSGNENEAFAMSSEGVITVDKPSLLDYETEPNIRLIVSASVVGDGPYTAIHGYATV
YIQLQDENDNSPRFTQDIYSISVWEEQQPGIFVMPVQATDADSENNGWVWYFISSGNLDE
SFELEPLTGFLKTKLKLDREVHEKYTLIVNAVDQSEIRRTGTSTVSVLVVDTNDHSPTLN
VPAAPLLVSEGTAVGSLITTVTANDQDASPVITFSFPQEGNPGEHFSIDRNEGKIFLNKP
LDFERSQNFTLTIQASDIGSDVTHNVTQNIHVVVTDVNDNPPVFLQQSYHTTFPELALPN
THVITVQAKDLDSHENGRVSYRLDNVLPNKPIFQINHDTGEITVNKSEPLNPQSSVFNLE
VEAYDHGSPRRVQSASVRVQITDINNNPPMFNQQGYEASVIESASRDFSIINITATDADY
SRDNNVIVYRILSGNTDKVFKIRTIDGPGTQVFGEICVAGELDRESVDRYSLTVAAIDQG
TPSLSSNTTVLINVLDVNDNRPTFNQTSYHGRAEIPENAKANTTLLRLVADDNDGGAFGH
VTYSLSRARSRSTDLTCTNDRDIMRVNSATGEVYATQDLDFEQCDRYFFYVVATDAGGSS
DIIPVSIDVLPVDEFAPMF
Nucleotide sequence
Length: 6,897
>Cisavi.CG.ENS81.R17.1741144-1785194.16426.t
GACTTTAATGTCTTGGAAAATGCAACAATTGGAACTGAAATTGGCCGGCTTGATACAACA
GAGCAAAATGGATATTATATTACATCAGAAGACAGTAACCCCTTTATGCAGTATTTTGAC
CGTGGTGTAGTGGAAAACCAAGGGATTATAAAAACCATTAAAAAGCTTGATCACGAAACT
TTCAGTTCTTTTGATATAGCAGTATATGACAGTGTTTTAAACAGATATTTTGAGGTACGA
ATTGATGTAACAGACATAAATGATCATGCTCCAGAATTTCGAGTCAGTCAATTGAATCTT
ACAATTTCCGAAGCAAGTCAAATTGGGGCCAAGTACAACTTGGGCACCGCTGTTGATCCA
GACTCAGACCCGTTTAATGTACAAGGATATACAATCATATCTGGTAATGAGGACAAAGCA
TTCAGGTTGAACAACAGACACATTAATGGACAAATCTATGTGGATTTAATAGTGAACCAG
ACATTAAACCGGGAGCTTGTGTCCAACTATTCCTTTACAGTTGAGGCATTCGATGGAGAT
GTTCCACCAAAAACTGGCCAGCTTGACGTTTACATTGATATCTCAGATGTTAACGACAAT
CCCCCTGTATTTGACTTCAGCAGATACACAGTCAGGTTATCAGAAAATGAACCAGTGGGT
AGAGATGTAATTACACTCAATGCAACCGACCAAGACATTGGTCAAAATGCCATGTTGACC
TACCGCATTGACCGTAGCCAAAGTGACCCTGGTTTCATCTTTGAGATTGAAAGTAACAGC
GGACGGATATATCTCAACAAAAAACTTGACTTTGAGCAGGTGGTGCAGCACAAACTGGTA
GTTGAAGCCAGAGACGAAGGTTCGGAACCACAAGTTGGATCTACTGTGGTCATTGTTGAA
GTAACGGATGTAAATGACAACGAACCTCAAATTAATGTGATTTTCTTGGATGCAGGTGAA
GCAAAGGTGTCTGAAGGGGCAGAGCCAGGTGATTATATTGCTCGCGTGTCGGTTTCAGAC
CAGGATCTCGGCGAACTTAGCCAAGTTAACGTCTCTCTGGAGGGTGGAAATGGAAGGTTC
GGACTGCAGACAGAAAACAACATTATATATCTGGTTTGCGTGAAGCTCAAGTTAGACAGA
GAAACAGAATCATTGTATCACATTACCTTGAATGCCGTTGATTTTGGCAGTCCACCCCAG
TCGGCGACGACATCGTTCACAATAACAGTGGAAGATATCAACGACAATCCGCCGCGCTTT
CCCAGTGATTTGATCGAGATTGAACTCTCCCAAAGCGCTTTCCCCGGCACTTTCGTTACC
CAGCTTCAATCCACGGACGCCGACATAGGACGCAACGCAGAAGTCACATACAGATTAGAT
GGCTCCCCGCAAAGTCTGTGGCTCAACATTAATCCGCACTCGGGACTGATCACGACCGCA
CGGAGTTTGGATAGTTTGACCAGTCCGGAGTTACAAGTGACGGTGTGGGCCACTGACGGA
GGGACGCCCGCATTGGCATCGAACGCAACTCTGGTGATTCGACTTAGTGATGCTGTGAAC
TCTCCGCCTCGCTTCCAATCTTCCTCCTACGCTGTATCCGTGCCGGAGGATGCTGCCGTC
GGTCACTGCTTCTTGAAGGTTCACGCTACGGATCCCGATTCTAGTGTAATCTCATACTCC
TTCGTGATTGGCTCGTTGCAAGATCCGCCCACCAACTTCCAAGTGAACTCCAGTAGCGGA
GATGTTTGTGTGACTTCTTCTCTAAACAGGGAAACCACCGCGAGTTACGATCTTCAGATC
CAGGCCACTGATCAGGGTGGGCAGTGGGACAGAGCGCCACTAGTGATTACCATTGAAGAT
GTAAACGACAACAAACCCGTCTTCAGTCCCGTTTCTTACGTCATAAACGTGGATAGAAAC
GCTGACGTCGGAACTCCGATCACAAAGCTCACTGCCACTGACGCCGATGACGTCACAGGG
AGCGGTTACGGTCGGGTGACGTTCGTAATGACGTCAGGGAACGATGAAGCGCTGTTTGCA
CTTGATACTGAAACAGGACGCATATCTGTCGCGAAACCACTCACAACTAACGGCGTTGGA
TCAATGTATGAGATTGATGTAGCAGCTGTTGATGGGGGAGGACTTTCATCTGATGTGGAT
GCCTCTGTGGTGATCAGCATCGTGGATGGGAGCAGCACTGGAGGACCAGTCTTCACACAA
GCAAGATATTTCTTTCAAGCATCGGAAGCTGACCCAAAAGAAACATTGCTTGGCACAATC
TCAGCTACTGCCAATGATGGCAGAGCAGTGACGTACTTTATACGACATGATCCTCCACAC
AGCACTTGGTTCTCTGTGCGTCCAACCGGTGATGTCATAGTTCGGTCACCAATGGATAGA
GAAATTTTCCCATCCATTACCTTTCAGGTCATTGCATCATCAGGGTCTCCTCCTATTTTT
GGCTTTGCCATGGTAACAGTGACGATATCCGACGTCAACGACAACCCACCTCATTTTATA
TCCAGCTCCGCCGGTAGATTGGAGCCGATCATTATTCCATTCTCCTCATTGGTTGGTGCC
ACGCTGCACTCTGTGGTTGCTATTGACAACGATGAGGGTAGAAATGGCCAGGTGAAATAC
CGTCTACAATCTGATTTTTTCTCCATTGACTCAAACACAGGCGTCATATTGCTCACAAGT
GCACTTCCCCATCAGGCCACCAATTATAGTGTGACCATAGAGGCATATGACCAAGGGCAA
TCCCCACACGTTACTTCAGTGGAGTTGATAATTCGCACCATCCAACCTGATCCCAACTGC
CCAGTGTTCCCTGAAGATTTTCGATTTAGTGTTGCCGAAGATACAGCACTCTCTAAAAGG
TATTTTAGCAGCATCCACGCAAGTACAACCAACAGCACAGCAAAGATAGCTTACTACCTT
CAATCGAGCTCCTCTGCTTTTATATTCTCCATCTTCTCCAATGGATCACTCTATCTTATC
CGAGGCTTGGATTATGAAACACAAGACACATATTCATTTGAGGTGGAAAAAAGAGAATCA
TTCGACATCAGTCGCATCATATCAGCCCAGATCAATCTCCGAGATGTGAACGATCACACT
CCGCGATTTAACTCCGGATCAATGATCTTTGGAGTGGAGGAGAACACAAGGATAGGAGAG
GAGGTGTACAGATTTAGAGCTGTCGACCCTGATTCTGGTTTAAGCGGTCGACTGACCTAC
TCACTTGTCAGCCAAACCCCGGCTTCTGTTTTCCGGATCAACAGTGACACAGGAGCACTC
TTTGTGGATTCAGGGATTGATAGAGAGGCTGTGGATCAGTATATCCTTGTTGTGACTGAC
CGCTCCCCTACTTCCCCACGCTTTTCCACTGCATCAGCTCGTGTAATCGTCCGTGACGTG
AATGACAACTCGCCGCGATTCGTTGGACATCACATGACCTACGTAGCGGAGGATGAACCA
ATAGGATACCCGGCCATGAGGCTTGCTGCAGAGGACGCAGACGCAGGAGTCAATGGTCGT
GTGATGTACGCGATTGAGTCGGTGACATCCGACCTTGGCAACTCCGCAGAGGAAATGTCG
TATTTTCACATCGACTCGAACACAGGTGTGATCACAGTTGCAAAACAGTTGGACTTTGAA
CGCAGCAAGACACATTCTATTAATGTATCGGCATCTGACCTTGCTACAAACCAAAGAACC
ACTCACCAGATGATTACAATTCATTTGATGGACGTGAATGACGTGACGCCACATTTCGAA
CGAACCACGTACCAAGCTGAGGTCATGGAAGGTCAAATTGCAGGAACAATCGTTACCAAG
GTTACTGCATTAGACGAGGATTCAGGTGAAAATGGCCTTCTGACCTATCAGCTCCAAGCA
AGTTCAGAGAGTGCAGCTTTTGTGATAGACCCAAATAATGAAGTGATAAGTCTGGCAATG
GAGTTGGACAGAGAAAACAAATCCAGCTACAGGCTTACAGTGTTCGCACAAGACAGCGCC
TTCCCATCATTATACGACTGGTGCTTTGTGCTCGTCACTGTCGTTGACGTCAATGACAAT
GCGCCTCAGTTCTCACCACTCGACGGCAGCATAGTGCCGCCATTATTGTCAAGACTGGAG
ATACCGGAGCACATAGAAGGGCCGCAGGTGGTGCACACAATAGCTGCACGTGACGCTGAC
ATTGGGGAAAATGGCCAAATCACTTATGCCATTTCAGGTGAACACAATGACATTAGTGAT
TTTTCAATTAATCCCTCGACTGGTGAGTTGTCAATCACAAGGCGGCTGGATCGGGAATTA
ACCGGCTTATACCAGTTGCAAGTGACTGCCAGTGATAATATCCACACCACGTCAGGGCAG
ATCGAAGTCACGGTGTTGGATTGGAATGACAATGATCCACAGTTTGTGGCTGCTTCATAC
AACGGCCAAGTGGCTGAAGGATTGTCAAGGGGTCAATACGTGCTCACAGTTCGAGCTACG
GATGCAGACATTGGTTTAAACGGGGAAATTAGCTACTTCCTATCCAACACCACTGGACTG
GATGGAAAGTTCACAGTGGACACTATGACCGGAGTGGTGACAACCACTGCCCCACTGGAT
AGGGAAGAAAAGGGGAGTTATAACTTCTTGGTGGAAGCAGTTGACGCGGCGCCGTATGGT
CCAAGATCAAGCACAGTACCAGTTTCTATTACCGGTAGAATACGTGGCACTTACTTCTTA
CCCAACTATAACCCAGTGTTGAGGTATACCCATGTTATAACACGCCCTGCGCCTGCCCTA
ATGACAACGATGATCTCCTATTTATTTTTTATATTTGCTATTTTCACAGTTTTTGGAAAT
GAGTCCATGAATCAAACTGTGTTCGAAATCGATCGAATCCACGGCAACATCAGGACACGC
GAAGCAATCCCTTCAAACTTCCCAAACCGTTCTTCATTGATCATCCTGGCTTCTGATGGG
GGTAATCCCCCAATGCGGGCTTCAGCTGTCATTGAAATCAATCTAGATGGTGATAACATG
GTTTATCAGTTAAACTCCGGCAATGAAAACGAAGCATTCGCAATGTCAAGTGAAGGGGTG
ATCACTGTTGACAAACCAAGCTTATTGGATTACGAGACTGAGCCTAACATACGACTTATA
GTATCGGCTTCAGTGGTTGGTGATGGTCCCTACACCGCGATACACGGCTACGCTACTGTG
TACATTCAACTGCAGGATGAAAACGACAACTCGCCGAGATTCACTCAGGATATTTACTCC
ATCAGCGTGTGGGAGGAACAGCAACCTGGCATCTTTGTTATGCCGGTACAAGCCACTGAT
GCAGACTCGGAAAACAATGGATGGGTGTGGTACTTTATTAGCTCCGGCAACTTGGACGAA
TCGTTTGAACTTGAACCACTTACTGGGTTCCTTAAAACCAAGCTGAAACTCGACCGAGAG
GTTCATGAGAAATACACGTTGATAGTGAACGCTGTGGATCAGAGTGAGATAAGACGCACC
GGCACCAGTACCGTGTCTGTGCTCGTGGTCGACACCAATGACCACAGTCCGACCCTCAAC
GTGCCTGCTGCCCCGCTGTTAGTGAGCGAGGGCACAGCGGTCGGGAGCCTGATTACAACG
GTGACCGCAAATGATCAAGACGCGTCGCCTGTCATCACCTTCTCGTTCCCGCAAGAGGGG
AATCCCGGCGAGCACTTCAGCATTGATAGAAATGAAGGAAAGATATTCTTAAACAAACCA
CTTGATTTCGAGCGCTCTCAGAACTTCACGCTTACCATTCAAGCCAGTGATATTGGCAGT
GACGTCACGCACAACGTCACTCAGAATATTCACGTCGTCGTCACGGACGTCAATGACAAT
CCACCTGTCTTTCTGCAGCAGTCTTATCACACAACCTTTCCTGAACTCGCACTACCCAAC
ACACATGTGATAACAGTCCAGGCAAAGGATTTGGACTCTCATGAAAACGGAAGAGTATCT
TACAGACTGGATAATGTTCTGCCGAATAAACCAATATTTCAAATCAACCACGACACAGGT
GAGATCACCGTAAATAAATCGGAGCCGCTGAACCCTCAGTCTTCCGTGTTCAACCTCGAA
GTTGAAGCTTACGACCACGGAAGTCCACGTCGAGTGCAATCCGCATCTGTTCGTGTGCAG
ATAACCGACATAAACAACAACCCTCCGATGTTCAACCAACAAGGTTATGAAGCTTCGGTG
ATCGAGTCCGCATCACGTGACTTCTCTATCATTAATATCACCGCTACCGATGCCGACTAT
TCACGTGACAACAACGTCATTGTTTACCGAATTCTATCCGGCAACACTGACAAGGTGTTT
AAGATTCGCACCATAGACGGGCCGGGGACGCAGGTGTTCGGGGAGATATGTGTGGCAGGG
GAACTTGACAGGGAATCCGTCGACCGCTACTCTCTCACTGTGGCCGCAATCGACCAGGGA
ACCCCCAGTCTCAGCAGCAATACCACAGTGTTGATCAACGTACTCGACGTGAACGACAAT
CGGCCGACATTCAACCAAACATCATACCATGGTAGAGCTGAAATCCCGGAGAACGCCAAG
GCCAACACCACACTTCTCCGTCTCGTGGCGGACGACAATGATGGCGGCGCGTTTGGACAC
GTGACCTACAGCCTGTCACGTGCTCGGTCGCGCTCCACCGACTTGACGTGCACGAACGAT
CGGGACATCATGCGAGTGAACTCCGCAACAGGGGAAGTGTACGCAACACAAGATCTTGAC
TTCGAGCAGTGCGACCGGTATTTCTTTTATGTTGTGGCGACCGACGCGGGCGGATCCTCC
GACATAATACCGGTGTCCATTGATGTACTGCCAGTGGATGAGTTCGCACCAATGTTT
| SMART |
Cadherin (IPR002126) - T[14-91] 0.21 - T[115-202] 6.4E-15 - T[226-309] 8.3E-27 - T[336-418] 2.0E-19 - T[442-523] 3.1E-16 - T[547-626] 1.4E-22 - T[650-733] 1.1E-4 - T[760-837] 1.1E-12 - T[865-941] 7.9E-14 - T[962-1041] 1.4E-4 - T[1065-1145] 2.8E-19 - T[1168-1257] 1.3E-22 - T[1281-1362] 2.2E-26 - T[1394-1473] 1.1E-23 - T[1497-1571] 4.0E-14 - T[1670-1752] 2.0E-8 - T[1776-1857] 2.1E-22 - T[1881-1962] 9.1E-21 - T[1986-2069] 2.4E-20 - T[2093-2182] 1.3E-23 - T[2208-2297] 4.9E-13 |
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[81-211] 1.33E-20 - T[192-313] 3.14E-29 - T[304-412] 4.32E-17 - T[408-517] 1.31E-24 - T[521-628] 1.16E-21 - T[621-729] 3.28E-18 - T[735-858] 4.97E-18 - T[851-949] 3.53E-15 - T[939-1043] 1.01E-7 - T[1031-1151] 6.15E-23 - T[1140-1252] 2.22E-22 - T[1247-1375] 1.22E-29 - T[1357-1467] 1.57E-21 - T[1463-1571] 2.71E-24 - T[1676-1754] 9.28E-8 - T[1742-1861] 4.58E-27 - T[1853-1964] 1.14E-19 - T[1952-2068] 2.14E-25 - T[2059-2191] 2.86E-27 - T[2172-2299] 7.07E-21 |
| Pfam |
Cadherin (IPR002126) - T[100-194] 9.5E-10 - T[209-302] 2.1E-20 - T[321-411] 1.5E-14 - T[427-515] 7.1E-13 - T[530-618] 2.3E-14 - T[633-727] 4.1E-10 - T[743-829] 8.3E-7 - T[857-931] 1.7E-8 - T[1052-1137] 3.8E-15 - T[1155-1249] 1.5E-14 - T[1264-1354] 3.1E-18 - T[1380-1465] 3.2E-17 - T[1480-1571] 1.5E-20 - T[1759-1849] 5.4E-18 - T[1868-1950] 1.8E-12 - T[1969-2062] 4.2E-15 - T[2076-2175] 4.5E-20 - T[2193-2289] 1.6E-11 |
| ProSitePatterns |
Cadherin_CS (IPR020894) - T[192-202] . - T[408-418] . - T[616-626] . - T[827-837] . - T[1135-1145] . - T[1352-1362] . - T[1463-1473] . - T[1742-1752] . - T[1847-1857] . - T[2172-2182] . |
| PRINTS |
Cadherin (IPR002126) - T[252-271] 2.1E-34 - T[525-554] 2.1E-34 - T[595-607] 2.1E-34 - T[607-626] 2.1E-34 - T[736-749] 2.1E-34 - T[993-1019] 2.1E-34 - T[1129-1146] 2.1E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FAT4_HUMAN | 31.247 % | 840 | 0 |
| PCD16_HUMAN | 30.647 % | 886 | 0 |
| PCD23_HUMAN | 30.071 % | 689 | 0 |