- Transcript 'KH2012:KH.C6.101.v1....' >
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- Transcript 'Cisavi.CG.ENS81.R17....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R17.1741144-1785194.16427.t
Possible name(s)
DCHS1; DCHS2; FAT4
Gene model
Location
R17 [1,746,382 / 1,764,317]
Amino acid sequence
Length: 1,646
>Cisavi.CG.ENS81.R17.1741144-1785194.16427.p
PFLIPQVIASSGSPPIFGFAMVTVTISDVNDNPPHFISSSAGRLEPIIIPFSSLVGATLH
SVVAIDNDEGRNGQVKYRLQSDFFSIDSNTGVILLTSALPHQATNYSVTIEAYDQGQSPH
VTSVELIIRTIQPDPNCPVFPEDFRFSVAEDTALSKRYFSSIHASTTNSTAKIAYYLQSS
SSAFIFSIFSNGSLYLIRGLDYETQDTYSFESCFATADVTIEVTDVNDNAPIFSKQTYRF
NIEENKESGTVGVVSATDADSGDPLVYSFVVNSEIFSLHRSTGVITTLTSVDYDITKEYS
ILVQVSDGQHLAQSLMRITVIDVNDNSPQFVLTSAEHLAVVSVEAQTGTWVADLKATDAD
SDANGEISYSSTTQDDDMFHIVGNTGSIIVNTALSMGLYSVQVTAQDNGSPIRQTSTTLQ
VTNENPAEFNSNKFVFAPIESSNPGTVLGTFSTQGSSRRRRSLPSYPQFRIASGNDDGMF
HINRTTGDLVLLHRFDSETKSQYLLEVIFAIFVESFDISRIISAQINLRDVNDHTPRFNS
GSMIFGVEENTRIGEEVYRFRAVDPDSGLSGRLTYSLVSQTPASVFRINSDTGALFVDSG
IDREAVDQYILVVNVTDRSPTSPRFSTASARVIVRDVNDNSPRFVGHHMTYVAEDEPIGY
PAMRLAAEDADAGVNGRVMYAIESVTSDLGNSAEEMSYFHIDSNTGVITVAKQLDFERSK
THSINVSASDLATNQRTTHQMITIHLMDVNDVTPHFERTTYQAEVMEGQIAGTIVTKVTA
LDEDSGENGLLTYQLQASSESAAFVIDPNNEVISLAMELDRENKSSYRLTVFAQDSAFPS
LYDWCFVLVTVVDVNDNAPQFSPLDGSIVPPLLSRLEIPEHIEGPQVVHTIAARDADIGE
NGQITYAISGGNTDSDFSINPSTGELSITRRLDRELTGLYQLQVTASDNIHTTSGQIEVT
VLDWNDNDPQFVAASYNGQVAEGLSRGQYVLTVRATDADIGLNGEISYFLSNTTGLDGKF
TVDTMTGVVTTTAPLDREEKGSYNFLVEAVDAAPYGPRSSTVPVSITVSDVNDNPPVFVE
TLIRVNISRATNPGVTVAHVTANDADTELFGSVTYSFGNESMNQTVFEIDRIHGNIRTRE
AIPSNFPNRSSLIILASDGGNPPMRASAVIEINLDAVNFAYLQFDQMSYEVVMSETVQRG
HRVSATLHGATPSGSNMVYQLNSGNENEAFAMSSEGVITVDKPSLLDYETEPNIRLIVSA
SVVGDGPYTAIHGYATVYIQLQDENDNSPRFTQDIYSISVWEEQQPGIFVMPVQATDADS
ENNGWVWYFISSGNLDESFELEPLTGFLKTKLKLDREVHEKYTLIVNAVDQSEIRRTGTS
TVSVLVVDTNDHSPTLNVPAAPLLVSEGTAVGSLITTVTANDQDASPVITFSFPQEGNPG
EHFSIDRNEGKIFLNKPLDFERSQNFTLTIQASDIGSDVTHNVTQNIHVVVTDVNDNPPV
FLQQSYHTTFPELALPNTHVITVQAKDLDSHENGRVSYRLDNVLPNKPIFQINHDTGISR
TQDHKIFLISWPLNQKYYLSSIGEITVNKSEPLNPQSSVFNLEVEAYDHGSPRRVQSASV
RVQITDINNNPPMFNQQGYEASVIES
Nucleotide sequence
Length: 4,938
>Cisavi.CG.ENS81.R17.1741144-1785194.16427.t
CCTTTTTTAATCCCACAGGTCATTGCATCATCAGGGTCTCCTCCTATTTTTGGCTTTGCC
ATGGTAACAGTGACGATATCCGACGTCAACGACAACCCACCTCATTTTATATCCAGCTCC
GCCGGTAGATTGGAGCCGATCATTATTCCATTCTCCTCATTGGTTGGTGCCACGCTGCAC
TCTGTGGTTGCTATTGACAACGATGAGGGTAGAAATGGCCAGGTGAAATACCGTCTACAA
TCTGATTTTTTCTCCATTGACTCAAACACAGGCGTCATATTGCTCACAAGTGCACTTCCC
CATCAGGCCACCAATTATAGTGTGACCATAGAGGCATATGACCAAGGGCAATCCCCACAC
GTTACTTCAGTGGAGTTGATAATTCGCACCATCCAACCTGATCCCAACTGCCCAGTGTTC
CCTGAAGATTTTCGATTTAGTGTTGCCGAAGATACAGCACTCTCTAAAAGGTATTTTAGC
AGCATCCACGCAAGTACAACCAACAGCACAGCAAAGATAGCTTACTACCTTCAATCGAGC
TCCTCTGCTTTTATATTCTCCATCTTCTCCAATGGATCACTCTATCTTATCCGAGGCTTG
GATTATGAAACACAAGACACATATTCATTTGAGTCATGTTTCGCCACTGCTGATGTCACA
ATCGAGGTAACAGATGTGAACGACAACGCACCAATATTTAGCAAACAAACATATCGCTTC
AACATCGAGGAAAATAAAGAAAGTGGCACCGTTGGCGTGGTATCTGCCACCGATGCTGAC
AGCGGCGACCCACTCGTCTACTCATTCGTGGTGAATTCGGAAATATTCTCATTACATCGT
TCAACAGGTGTCATTACCACATTAACATCTGTCGATTATGACATCACAAAAGAGTATTCT
ATTCTCGTGCAAGTTAGCGATGGGCAACATCTTGCTCAAAGTTTAATGCGCATCACTGTA
ATAGACGTTAACGACAATTCACCTCAATTTGTGCTGACATCAGCAGAACACTTAGCTGTG
GTGTCTGTTGAGGCTCAAACAGGAACTTGGGTTGCCGATTTGAAAGCCACCGATGCAGAC
AGTGATGCCAATGGAGAAATATCATACTCCAGTACAACACAAGATGATGATATGTTTCAT
ATTGTTGGAAACACTGGAAGCATAATTGTAAACACTGCGCTTTCAATGGGTTTATACTCT
GTCCAAGTAACGGCTCAAGACAACGGATCTCCCATTCGTCAAACCTCAACAACTTTACAG
GTAACTAATGAAAATCCGGCTGAATTTAACTCAAACAAATTTGTTTTCGCTCCGATTGAA
AGCTCAAATCCTGGAACTGTTCTTGGAACTTTCAGCACCCAAGGGTCCAGTCGTAGGCGA
CGCTCGCTGCCATCATACCCTCAGTTCCGAATCGCTAGTGGTAACGATGACGGCATGTTC
CATATCAACCGTACCACAGGAGATCTCGTGTTGCTCCACAGATTCGATTCTGAAACAAAA
TCGCAATATTTGCTTGAGGTGATTTTTGCTATTTTTGTAGAATCATTCGACATCAGTCGC
ATCATATCAGCCCAGATCAATCTCCGAGATGTGAACGATCACACTCCGCGATTTAACTCC
GGATCAATGATCTTTGGAGTGGAGGAGAACACAAGGATAGGAGAGGAGGTGTACAGATTT
AGAGCTGTCGACCCTGATTCTGGTTTAAGCGGTCGACTGACCTACTCACTTGTCAGCCAA
ACCCCGGCTTCTGTTTTCCGGATCAACAGTGACACAGGAGCACTCTTTGTGGATTCAGGG
ATTGATAGAGAGGCTGTGGATCAGTATATCCTTGTTGTGAATGTGACTGACCGCTCCCCT
ACTTCCCCACGCTTTTCCACTGCATCAGCTCGTGTAATCGTCCGTGACGTGAATGACAAC
TCGCCGCGATTCGTTGGACATCACATGACCTACGTAGCGGAGGATGAACCAATAGGATAC
CCGGCCATGAGGCTTGCTGCAGAGGACGCAGACGCAGGAGTCAATGGTCGTGTGATGTAC
GCGATTGAGTCGGTGACATCCGACCTTGGCAACTCCGCAGAGGAAATGTCGTATTTTCAC
ATCGACTCGAACACAGGTGTGATCACAGTTGCAAAACAGTTGGACTTTGAACGCAGCAAG
ACACATTCTATTAATGTATCGGCATCTGACCTTGCTACAAACCAAAGAACCACTCACCAG
ATGATTACAATTCATTTGATGGACGTGAATGACGTGACGCCACATTTCGAACGAACCACG
TACCAAGCTGAGGTCATGGAAGGTCAAATTGCAGGAACAATCGTTACCAAGGTTACTGCA
TTAGACGAGGATTCAGGTGAAAATGGCCTTCTGACCTATCAGCTCCAAGCAAGTTCAGAG
AGTGCAGCTTTTGTGATAGACCCAAATAATGAAGTGATAAGTCTGGCAATGGAGTTGGAC
AGAGAAAACAAATCCAGCTACAGGCTTACAGTGTTCGCACAAGACAGCGCCTTCCCATCA
TTATACGACTGGTGCTTTGTGCTCGTCACTGTCGTTGACGTCAATGACAATGCGCCTCAG
TTCTCACCACTCGACGGCAGCATAGTGCCGCCATTATTGTCAAGACTGGAGATACCGGAG
CACATAGAAGGGCCGCAGGTGGTGCACACAATAGCTGCACGTGACGCTGACATTGGGGAA
AATGGCCAAATCACTTATGCCATTTCAGGTGGAAATACTGACAGTGATTTTTCAATTAAT
CCCTCGACTGGTGAGTTGTCAATCACAAGGCGGCTGGATCGGGAATTAACCGGCTTATAC
CAGTTGCAAGTGACTGCCAGTGATAATATCCACACCACGTCAGGGCAGATCGAAGTCACG
GTGTTGGATTGGAATGACAATGATCCACAGTTTGTGGCTGCTTCATACAACGGCCAAGTG
GCTGAAGGATTGTCAAGGGGTCAATACGTGCTCACAGTTCGAGCTACGGATGCAGACATT
GGTTTAAACGGGGAAATTAGCTACTTCCTATCCAACACCACTGGACTGGATGGAAAGTTC
ACAGTGGACACTATGACCGGAGTGGTGACAACCACTGCCCCACTGGATAGGGAAGAAAAG
GGGAGTTATAACTTCTTGGTGGAAGCAGTTGACGCGGCGCCGTATGGTCCAAGATCAAGC
ACAGTACCAGTTTCTATTACCGTGTCTGATGTAAACGACAATCCTCCTGTGTTTGTTGAG
ACGCTGATCCGTGTGAACATATCGCGTGCAACCAACCCCGGTGTCACAGTCGCTCATGTA
ACAGCTAACGACGCAGACACTGAATTGTTTGGATCAGTAACATACAGTTTTGGAAATGAG
TCCATGAATCAAACTGTGTTCGAAATCGATCGAATCCACGGCAACATCAGGACACGCGAA
GCAATCCCTTCAAACTTCCCAAACCGTTCTTCATTGATCATCCTGGCTTCTGATGGGGGT
AATCCCCCAATGCGGGCTTCAGCTGTCATTGAAATCAATCTAGATGCAGTGAACTTCGCA
TATCTCCAGTTTGATCAAATGTCGTATGAAGTTGTCATGTCCGAGACAGTACAAAGAGGC
CACAGAGTCAGTGCCACATTGCATGGTGCAACTCCAAGTGGGAGTAACATGGTTTATCAG
TTAAACTCCGGCAATGAAAACGAAGCATTCGCAATGTCAAGTGAAGGGGTGATCACTGTT
GACAAACCAAGCTTATTGGATTACGAGACTGAGCCTAACATACGACTTATAGTATCGGCT
TCAGTGGTTGGTGATGGTCCCTACACCGCGATACACGGCTACGCTACTGTGTACATTCAA
CTGCAGGATGAAAACGACAACTCGCCGAGATTCACTCAGGATATTTACTCCATCAGCGTG
TGGGAGGAACAGCAACCTGGCATCTTTGTTATGCCGGTACAAGCCACTGATGCAGACTCG
GAAAACAATGGATGGGTGTGGTACTTTATTAGCTCCGGCAACTTGGACGAATCGTTTGAA
CTTGAACCACTTACTGGGTTCCTTAAAACCAAGCTGAAACTCGACCGAGAGGTTCATGAG
AAATACACGTTGATAGTGAACGCTGTGGATCAGAGTGAGATAAGACGCACCGGCACCAGT
ACCGTGTCTGTGCTCGTGGTCGACACCAATGACCACAGTCCGACCCTCAACGTGCCTGCT
GCCCCGCTGTTAGTGAGCGAGGGCACAGCGGTCGGGAGCCTGATTACAACGGTGACCGCA
AATGATCAAGACGCGTCGCCTGTCATCACCTTCTCGTTCCCGCAAGAGGGGAATCCCGGC
GAGCACTTCAGCATTGATAGAAATGAAGGAAAGATATTCTTAAACAAACCACTTGATTTC
GAGCGCTCTCAGAACTTCACGCTTACCATTCAAGCCAGTGATATTGGCAGTGACGTCACG
CACAACGTCACTCAGAATATTCACGTCGTCGTCACGGACGTCAATGACAATCCACCTGTC
TTTCTGCAGCAGTCTTATCACACAACCTTTCCTGAACTCGCACTACCCAACACACATGTG
ATAACAGTCCAGGCAAAGGATTTGGACTCTCATGAAAACGGAAGAGTATCTTACAGACTG
GATAATGTTCTGCCGAATAAACCAATATTTCAAATCAACCACGACACAGGTATATCAAGG
ACCCAAGATCATAAGATATTTTTAATCAGCTGGCCCTTAAACCAAAAATATTATTTGTCA
AGCATTGGTGAGATCACCGTAAATAAATCGGAGCCGCTGAACCCTCAGTCTTCCGTGTTC
AACCTCGAAGTTGAAGCTTACGACCACGGAAGTCCACGTCGAGTGCAATCCGCATCTGTT
CGTGTGCAGATAACCGACATAAACAACAACCCTCCGATGTTCAACCAACAAGGTTATGAA
GCTTCGGTGATCGAGTCC
| ProSitePatterns |
Cadherin_CS (IPR020894) - T[24-34] . - T[221-231] . - T[318-328] . - T[632-642] . - T[849-859] . - T[1066-1076] . - T[1279-1289] . - T[1384-1394] . - T[1489-1499] . |
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[24-146] 9.06E-20 - T[136-233] 3.53E-9 - T[227-330] 2.14E-21 - T[318-420] 2.0E-17 - T[423-508] 1.4E-9 - T[526-648] 1.96E-25 - T[637-749] 1.57E-22 - T[744-872] 7.98E-30 - T[854-963] 2.09E-23 - T[965-1071] 2.49E-26 - T[1066-1198] 6.28E-22 - T[1183-1291] 1.71E-10 - T[1279-1398] 3.01E-27 - T[1390-1501] 1.15E-19 - T[1489-1557] 2.9E-25 - T[1584-1645] 2.9E-25 |
| Pfam |
Cadherin (IPR002126) - T[54-128] 1.1E-8 - T[238-315] 1.1E-8 - T[344-422] 7.9E-13 - T[547-634] 3.5E-18 - T[652-746] 1.0E-14 - T[761-851] 2.1E-18 - T[877-961] 7.9E-20 - T[976-1068] 1.1E-21 - T[1090-1174] 1.9E-8 - T[1296-1386] 3.6E-18 - T[1405-1487] 1.2E-12 - T[1506-1625] 1.3E-10 |
| SMART |
Cadherin (IPR002126) - T[62-138] 7.9E-14 - T[159-231] 0.0014 - T[254-328] 3.2E-17 - T[354-427] 1.4E-4 - T[455-536] 0.052 - T[560-642] 2.6E-22 - T[665-754] 1.3E-22 - T[778-859] 2.2E-26 - T[891-969] 4.3E-24 - T[993-1076] 1.5E-29 - T[1100-1182] 0.0073 - T[1203-1289] 1.2E-9 - T[1313-1394] 2.1E-22 - T[1418-1499] 9.1E-21 - T[1523-1632] 7.2E-11 |
| PRINTS |
Cadherin (IPR002126) - T[584-603] 1.5E-30 - T[756-785] 1.5E-30 - T[826-838] 1.5E-30 - T[840-859] 1.5E-30 - T[922-948] 1.5E-30 - T[953-970] 1.5E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FAT4_HUMAN | 28.8 % | 497 | 3.93E-145 |
| PCD16_HUMAN | 30.478 % | 665 | 0 |
| PCD23_HUMAN | 32.048 % | 692 | 0 |