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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.596.v1...' > 
  2. Clone 'cien45718' > 
  3. Transcript 'Cisavi.CG.ENS81.R17....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R17.199942-201694.06332.t

Possible name(s)

RAPSN; RFWD3; ZNRF4

Gene model

Cisavi.CG.ENS81.R17.199942-201694

Location

R17 [199,941 / 201,694]

Sequences

Amino acid sequence

Length: 140

>Cisavi.CG.ENS81.R17.199942-201694.06332.p
MLECGNQFGYMMSVIGKAKVYHQTKDYQKALQEYLSGYKIAELIGNKMTCMRIHGELALL
FQRLSNQEEARSSTLRYHRLLELMDLFCGICGEPMAEKNEQLEALPCSHFFHLKCISSYD
TLETRVCPDCHKKSLKQVTL

Nucleotide sequence

Length: 808

>Cisavi.CG.ENS81.R17.199942-201694.06332.t
ACTCAGCAGCTGGTCTGATGTTAGAATGTGGAAATCAATTCGGATACATGATGTCCGTAA
TCGGAAAAGCTAAAGTCTACCATCAAACAAAGGACTATCAAAAGGCTTTGCAGGAATATC
TTTCTGGATATAAAATTGCAGAATTAATTGGAAACAAGATGACGTGTATGCGCATCCACG
GCGAGCTAGCGCTCCTCTTTCAACGATTATCAAATCAAGAAGAAGCGAGGTCAAGCACTC
TCCGGTACCACCGTTTGCTTGAGTTAATGGATTTGTTTTGTGGAATATGCGGCGAACCGA
TGGCCGAGAAGAACGAACAGCTCGAAGCGCTGCCATGTTCCCATTTTTTCCATCTCAAGT
GTATTTCCAGCTACGATACATTGGAAACTAGGGTGTGCCCAGATTGTCACAAGAAATCGT
TGAAGCAAGTCACACTTTGATGGTTGGAACGACTGGTTGCCAAATTTCTTTTTTATGTAC
CAATCTTAAACTATCGGTGAGGATCATATTTAGAGCACCCTCTGGCCCGAACTATGTTGT
GCGCGAAATGGGCCCCGACACATATATGTTACAATCCAACATATCGGTTTGCAATGGGAC
GTTAATGGTAAAACCAACCTACTTGTGTCGGACCGCATGGTGGAGTAATCGAACGCCGTA
TGTCCTTTTTTGTGCTGCAAGTTTCAATGTAGTGTTAAGTATACCATCGAAAGTATGGAA
TCTTTGTGTTTAATTAGCATTAGTATCCTCAGTGTGAATGACGATAATTTATTTTTTCAT
TAATACAACCACAAGTAACATGCAAATA

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[2-82] 2.0E-6
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[5-73] 3.13E-6
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[83-139] 7.7E-9
SMART
Znf_RING (IPR001841) - T[88-130] 2.8E-5
Pfam
Znf_RING (IPR001841) - T[88-130] 4.4E-8
ProSiteProfiles
Znf_RING (IPR001841) - T[88-131] 11.265

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAPSN_HUMAN 37.5 % 107 1.51E-28