- Transcript 'Harore.CG.MTP2014.S2...' >
- EST 'FF734867.1' >
- Transcript 'KH2012:KH.C3.330.v3....' >
- Transcript 'KH2012:KH.C4.356.v1....' >
- Transcript 'Cisavi.CG.ENS81.R173...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R173.20691-36878.11501.t
Possible name(s)
ZNF160; ZNF347; ZNF84
Gene model
Location
R173 [26,753 / 36,198]
Amino acid sequence
Length: 481
>Cisavi.CG.ENS81.R173.20691-36878.11501.p
ADPQQCHVCQKIFQKESQFKRHMLIHTGEKPFMCTHCGRGFNQKSALQIHMFKHSGQKPH
KCPYCPQEFKKPSDLVRHIRVHTQERPYKCQTCHKSFSVKTSLTTHARTHLGYKAFKCQI
CLKSFSTPGSLKIHLRVHTGSRPFKCNQCELSFRTASHRHNHILSHMRGTAHKRLRKPRK
DCLLCSKRFKKSSHLRQHVRTHTGEKPYQCNQCGLSVSSASNLKTHMSVHTGLKAHQCTT
CGQYFGSNNTLKRHMTTHSDARPYMCPYCQKTFKTNPTCKKHIATHKTALSNALSFQCDL
CCHSLESKSSLLSHIESHTSSKVVPCQSCFITFDSNGVPDEHKLFHNPSEFGCKSCHKVF
QSPSELELNGPVHPNVCQYCPKSFQKPSDLARHVRIHTGDKPFTCSRCGKSFSLKSTLVV
HEKAHLQNKMFRCHICDIMYASKASLKVHMRLHTGAKPYKCSLCPMTFRASSHRKSHMAT
H
Nucleotide sequence
Length: 1,443
>Cisavi.CG.ENS81.R173.20691-36878.11501.t
GCTGATCCTCAACAGTGCCATGTATGTCAAAAAATCTTCCAAAAAGAAAGTCAATTTAAG
AGACACATGCTCATTCATACTGGTGAAAAGCCATTCATGTGTACTCACTGTGGTAGGGGT
TTCAACCAAAAGAGTGCTCTTCAAATCCACATGTTTAAACATTCTGGTCAGAAACCCCAC
AAGTGTCCCTACTGTCCACAGGAATTTAAAAAGCCAAGTGATTTGGTTCGACATATTCGT
GTGCACACACAGGAGCGTCCTTATAAATGTCAGACCTGCCATAAGTCGTTCAGTGTTAAA
ACCTCTCTAACCACCCATGCAAGAACGCACCTTGGGTATAAAGCATTCAAATGTCAGATT
TGTCTGAAATCTTTTTCAACACCCGGTAGTCTGAAGATCCATCTACGAGTTCACACTGGG
TCACGACCCTTTAAATGCAACCAATGCGAGTTAAGTTTTCGGACTGCCAGTCATCGCCAC
AACCATATTTTATCCCATATGCGAGGAACTGCGCATAAAAGACTAAGAAAACCAAGGAAG
GATTGTCTGTTGTGTAGTAAGCGATTCAAGAAAAGTAGCCATTTGAGGCAACATGTAAGG
ACCCACACAGGAGAAAAGCCATACCAATGCAACCAGTGTGGTCTTTCAGTGTCATCCGCC
AGTAATCTCAAAACTCACATGTCCGTTCACACCGGTTTGAAAGCTCACCAATGTACCACT
TGCGGACAATATTTTGGTTCGAACAACACTTTGAAACGGCACATGACAACGCACAGTGAT
GCTCGCCCCTACATGTGCCCATACTGCCAGAAAACATTTAAAACGAACCCCACTTGCAAA
AAACACATTGCCACACACAAAACCGCCCTCTCTAATGCGTTATCATTCCAATGTGATCTT
TGCTGTCATTCATTGGAGTCGAAAAGTTCCCTGCTGTCCCACATTGAGTCGCATACCTCT
AGTAAAGTGGTTCCGTGCCAGAGTTGTTTCATAACCTTTGACAGCAACGGTGTGCCTGAT
GAGCATAAGCTATTTCATAATCCAAGTGAGTTTGGTTGCAAGAGTTGCCACAAAGTGTTC
CAGTCACCATCAGAGTTGGAATTAAATGGTCCCGTCCACCCCAATGTATGCCAGTATTGC
CCGAAAAGCTTTCAAAAACCAAGTGACCTTGCAAGGCATGTGCGTATTCACACTGGCGAT
AAGCCGTTTACTTGCAGCCGATGCGGAAAAAGTTTCTCTTTAAAATCAACATTGGTCGTC
CATGAAAAAGCTCATTTACAAAACAAGATGTTTCGTTGCCATATTTGTGATATCATGTAT
GCCAGTAAAGCAAGTTTAAAGGTCCACATGCGGCTACACACAGGTGCCAAGCCATACAAG
TGTTCCTTATGTCCCATGACCTTTCGTGCCTCTAGTCACAGGAAAAGTCATATGGCAACC
CAC
| SMART |
Znf_C2H2_type (IPR013087) - T[4-26] 0.028 - T[32-54] 6.6E-4 - T[60-82] 1.4E-4 - T[88-110] 0.0099 - T[116-138] 1.9E-4 - T[144-166] 0.74 - T[180-202] 1.1 - T[208-230] 0.0016 - T[236-258] 0.0031 - T[264-286] 0.0028 - T[296-318] 0.66 - T[324-346] 270.0 - T[375-397] 0.0066 - T[403-425] 0.02 - T[431-453] 7.3E-4 - T[459-481] 0.024 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[4-31] 13.838 - T[32-59] 15.126 - T[60-87] 14.378 - T[88-115] 13.838 - T[116-143] 15.168 - T[144-166] 8.683 - T[180-207] 15.293 - T[208-235] 13.006 - T[236-263] 13.443 - T[264-286] 9.224 - T[296-323] 10.221 - T[375-402] 14.815 - T[403-430] 13.318 - T[431-458] 13.277 - T[459-481] 10.408 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[6-26] . - T[34-54] . - T[62-82] . - T[90-110] . - T[118-138] . - T[146-166] . - T[182-202] . - T[210-230] . - T[238-258] . - T[266-286] . - T[298-318] . - T[377-397] . - T[405-425] . - T[433-453] . - T[461-481] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[13-69] 2.35E-18 - T[59-91] 1.15E-8 - T[96-153] 5.52E-18 - T[189-245] 2.83E-19 - T[234-286] 2.65E-12 - T[296-346] 1.28E-5 - T[383-438] 1.32E-17 - T[429-481] 1.42E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN665_HUMAN | 37.759 % | 323 | 2.77E-104 |
| ZN160_HUMAN | 39.463 % | 340 | 1.21E-108 |
| ZNF84_HUMAN | 38.144 % | 329 | 3.02E-105 |