Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R19.1821149-1839245.14915.t

Possible name(s)

IPO13; TNPO3

Gene model

Cisavi.CG.ENS81.R19.1821149-1839245

Location

R19 [1,821,148 / 1,839,245]

Sequences

Amino acid sequence

Length: 290

>Cisavi.CG.ENS81.R19.1821149-1839245.14915.p
MAVSQNATNVLQAVTNLYHNPNPAEKEKASKWLGEFQRSVFAWETADQLLRLKNDVESTY
FAAQTMRTKILFSFRELPPETHDSLRESLLSHIEQLAQMSPILTTQLCLAVSNLALQMPS
WKMPAVTFIQKYGKDQSSLTYLLELLTVLPEEVNNKSLRLGSNRRSEIIDQMEDSAPMVV
ELLKTYIGVVSDEKILAKIFKCLGSWFYLGVLPGNHVARCKLLDVPFSVMKDVSMSSSLY
EAACGCICAALFSTEDVTKNSDLVHLLFEGTHSLRDAYHNAISCRSYNSC

Nucleotide sequence

Length: 1,230

>Cisavi.CG.ENS81.R19.1821149-1839245.14915.t
TCACGTGTGTTTATTCCCGCCAGATGTACTGATAGCAACTTTAACTGAATAACGACGGGT
TTCTGGAGATAATTCATCATGGCTGTATCACAAAATGCAACAAACGTTCTACAGGCAGTT
ACAAATTTATACCACAACCCCAATCCTGCTGAAAAAGAGAAAGCTTCAAAGTGGCTTGGA
GAGTTTCAACGTTCGGTGTTCGCTTGGGAAACGGCTGATCAACTGCTTCGATTAAAAAAT
GATGTTGAATCAACTTATTTTGCTGCTCAGACAATGCGAACTAAAATATTGTTCTCATTT
AGGGAACTTCCCCCAGAAACTCATGACTCCTTAAGAGAATCGTTGCTCAGCCATATTGAA
CAGCTCGCCCAAATGTCACCCATCCTTACCACACAGTTGTGTCTTGCTGTGAGTAACCTC
GCCCTGCAAATGCCATCTTGGAAGATGCCGGCTGTAACGTTCATACAAAAGTACGGAAAA
GACCAATCATCATTGACGTATCTGCTGGAACTGCTCACTGTGCTGCCTGAAGAGGTGAAC
AACAAATCCTTGCGTCTTGGTTCGAACAGAAGGAGTGAGATAATAGATCAAATGGAAGAT
TCGGCTCCTATGGTGGTCGAACTGTTGAAGACTTATATTGGTGTAGTGTCAGATGAAAAG
ATTCTGGCCAAGATTTTCAAGTGTTTAGGAAGTTGGTTCTACCTGGGCGTTCTCCCTGGT
AACCACGTGGCGCGTTGCAAGCTGCTAGATGTGCCTTTCAGTGTGATGAAAGACGTCTCG
ATGTCATCAAGTCTGTACGAGGCTGCGTGTGGATGCATCTGCGCTGCGCTCTTCTCCACA
GAGGACGTGACGAAGAATTCCGACCTCGTTCACCTTCTCTTCGAAGGAACACACTCACTG
AGGGACGCCTACCACAATGCAATTTCATGCAGAAGTTATAATAGCTGCTGAATGGAAGAA
TGTTAGTTACCATCTCCGTGACTTTTGCCGACTATATAGGTGAACTTGGCATCGTGTTAA
GTTGATCGTGCATCTTCAACTATTTATTTCAAAATCAAGAACTTCTAAATTGCCAAAAAA
ATTGACTGTAAGCAGACACTGCCGATTGAAACGCTGTTTTTTTCTGATTTTCTGCACTTT
TTAGCATCTTTCTTTTATGGACGGAAAAAACTGGTAATATCTTTGGTTTAAAGAATTCTC
TATTTTACATTTTATATTTTCTGGTTTTCG

InterProScan

Gene3D	ARM-like (IPR011989) - T[2-290] 2.6E-97
SUPERFAMILY	ARM-type_fold (IPR016024) - T[9-250] 1.94E-25
SMART	Importin-beta_N (IPR001494) - T[29-95] 0.0035
Pfam	Importin-beta_N (IPR001494) - T[29-93] 9.2E-5
Pfam	Exportin-1/Importin-b-like (IPR013598) - T[101-247] 5.2E-21

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TNPO3_HUMAN	54.182 %	285	7.3E-90
IPO13_HUMAN	29.054 %	83.2	9.25E-18