- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.L9.10.v1.A...' >
- Transcript 'KH2012:KH.C10.507.v1...' >
- Transcript 'Boleac.CG.SB_v3.S285...' >
- Transcript 'Cisavi.CG.ENS81.R19....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R19.265659-268172.10134.t
Possible name(s)
GFI1; GFI1B; ZNF836
Gene model
Location
R19 [265,658 / 268,172]
Amino acid sequence
Length: 162
>Cisavi.CG.ENS81.R19.265659-268172.10134.p
KEFTTAHGLEVHVRRTHSAGERSFSCNVCNKTFGHAVTLGQHKATHNREKVFECHICHKT
FKRSSTLSTHLLIHSDTRPFPCPYCGKRFHQKSDMKKHTFIHTGEKPHKCRICGKAFSQS
SNLITHMRKHTGYKPFACDACDRAFQRKVDLRRHKESQHNVK
Nucleotide sequence
Length: 486
>Cisavi.CG.ENS81.R19.265659-268172.10134.t
AAGGAATTCACCACAGCTCATGGATTAGAGGTCCACGTGCGACGAACCCATTCGGCCGGC
GAGCGATCGTTCAGCTGCAATGTCTGCAACAAAACCTTCGGTCATGCGGTTACACTGGGA
CAACATAAAGCCACGCACAACAGGGAAAAGGTGTTCGAATGTCATATTTGCCACAAGACG
TTCAAACGGTCGTCCACCCTCTCCACACATCTGCTGATCCACAGCGACACTCGTCCCTTC
CCATGTCCATACTGCGGGAAGCGATTCCACCAGAAGTCGGACATGAAGAAACACACCTTC
ATACACACAGGCGAGAAACCTCATAAATGTCGGATCTGCGGCAAAGCATTCAGCCAGAGC
TCGAATCTTATAACCCATATGCGCAAGCACACCGGGTACAAGCCTTTCGCATGCGACGCG
TGCGACAGAGCCTTCCAACGTAAAGTGGATCTGAGAAGACACAAGGAATCCCAGCATAAT
GTGAAG
| PANTHER |
Gfi-1b (IPR037044) - T[1-162] 6.1E-97 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[22-74] 2.05E-13 - T[60-117] 4.05E-20 - T[102-154] 5.83E-20 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[24-51] 11.946 - T[52-79] 13.713 - T[80-107] 15.937 - T[108-135] 16.228 - T[136-162] 11.448 |
| SMART |
Znf_C2H2_type (IPR013087) - T[24-46] 0.03 - T[52-74] 0.021 - T[80-102] 0.0013 - T[108-130] 1.3E-4 - T[136-159] 0.015 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[26-46] . - T[54-74] . - T[82-102] . - T[110-130] . - T[138-159] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN836_HUMAN | 48.276 % | 145 | 4.45E-41 |
| GFI1B_HUMAN | 75.309 % | 263 | 3.69E-89 |
| GFI1_HUMAN | 77.16 % | 268 | 6.33E-90 |