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- Transcript 'Cisavi.CG.ENS81.R19....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R19.312355-314919.10194.t
Possible name(s)
RABGAP1; TBC1D12; TBCK
Gene model
Location
R19 [312,354 / 314,919]
Amino acid sequence
Length: 793
>Cisavi.CG.ENS81.R19.312355-314919.10194.p
AMPALLGCMSFVTAALPHNQCGSNGLPLTPNSIKVLGLAQKLKTLKHENLCSYVDFKCGR
HERIFAVSELYVDNVLDRIMAPSSLTQKEWNEFSVPKLSGYGLHHMTDGGTLLNGPLADV
WALCIVLMELLHKEVLWPDVENKSLVKRVLCLCANKSAQKNIEVLCQDFKEKNLLYETDQ
AIQSIKTILENGLCVNLSKRAMPYQILKQLDKDKSSVPNPTTNGYKIEYNGNTNPLLEMD
SDEVWYLWNLAGGDMIAEVLRSVTTTPSVRTMPSFVTLHGDLYGLEPSPENLFNPGFQLL
SLDTVESRLEVNSENISLIYPLLELDTSEEVSHESAKLPLLIRENDFDYQVHRIALYKRL
LLGYPYLREKLWKESRIDIPPFCRGKVWSGLLDVQGDIEDQYVHIDKDTPIITDRQIAVD
VPRCHQYDSMLSSPIAHGKLKRVLKAWLISHPQLTYWQGLDSLCAVFVHLNFNDEPRAWA
SLSQFIDKYLHKFFLKDNSAIIQEYLLVFSHLLSFHDPMLYCHMTEIGFIPDLYAIPWFL
TMFAHVFPLHKIVHLWDTLLLGNSSFPLCIGVAILQQLRGQLLESDFNECILLFSDLPEI
DIDGVVKKSIQVFCQSPKSSTFRVHARTEEKSKREPTSYYTEDYNTLPKTELSETAIPLS
ELKQEVCCRISADDLIQLGELQGANNSKTPAKLTKSSKPRIFVIDIRSSDEFVRGSIPGS
YNFPYITDKPIAQLIQTVLKQKPKVVVVVGNKGSREDREFCLELLKAGLIGVCVLHGGID
ILKPIGVLTVPSQ
Nucleotide sequence
Length: 2,382
>Cisavi.CG.ENS81.R19.312355-314919.10194.t
GCAATGCCTGCTTTATTAGGATGCATGTCATTTGTGACTGCTGCACTACCACATAACCAG
TGCGGTAGTAATGGATTACCACTGACTCCCAATTCCATCAAGGTACTTGGACTTGCGCAA
AAGTTAAAGACACTTAAACATGAAAACCTGTGCAGTTATGTCGATTTCAAATGCGGGAGG
CATGAAAGAATATTTGCAGTTTCTGAGCTTTATGTTGACAATGTTCTAGACAGAATCATG
GCACCTTCTTCTTTAACACAGAAAGAATGGAACGAATTTAGTGTCCCAAAATTGTCTGGG
TATGGTTTGCACCATATGACAGATGGTGGGACACTATTAAATGGTCCTTTGGCAGATGTG
TGGGCTTTGTGTATTGTGCTGATGGAGTTGCTACACAAGGAGGTTTTGTGGCCAGATGTC
GAAAATAAATCACTTGTTAAGCGTGTACTGTGCTTATGCGCTAACAAGAGCGCACAGAAA
AATATTGAAGTTTTGTGTCAAGATTTTAAGGAAAAGAATTTGCTGTATGAAACTGATCAA
GCGATACAATCCATAAAAACGATTCTAGAAAATGGACTCTGTGTGAATTTATCAAAAAGA
GCTATGCCATACCAAATTCTTAAACAGCTTGACAAAGATAAAAGTTCTGTTCCTAACCCC
ACAACAAATGGTTATAAAATTGAATACAATGGCAATACAAATCCCCTATTGGAAATGGAC
AGTGATGAAGTCTGGTACCTATGGAACTTGGCTGGTGGTGATATGATAGCTGAAGTTCTA
CGCTCTGTCACTACAACACCATCAGTCCGTACAATGCCTTCATTTGTTACATTGCACGGG
GACTTGTATGGTCTTGAACCATCACCTGAGAACTTGTTTAACCCAGGGTTTCAGCTTCTG
TCTTTGGACACTGTGGAAAGCAGACTAGAAGTCAACTCAGAGAACATCTCCCTCATATAC
CCGTTGCTCGAACTAGATACATCAGAAGAGGTCTCCCATGAATCTGCAAAGCTGCCTTTA
CTCATCCGTGAGAATGATTTTGACTACCAAGTCCACCGTATTGCTTTGTACAAACGTCTC
TTACTAGGATATCCCTACTTACGGGAGAAATTATGGAAAGAATCAAGGATAGACATACCA
CCTTTCTGCAGGGGTAAAGTATGGTCAGGTCTTCTTGATGTCCAAGGGGATATTGAGGAC
CAGTATGTTCATATTGATAAGGATACTCCTATAATCACAGACCGACAAATTGCAGTAGAT
GTTCCAAGATGCCACCAGTATGATTCTATGCTCAGTTCACCAATTGCACATGGAAAATTA
AAGCGAGTTTTGAAAGCGTGGCTGATTTCCCACCCTCAGTTGACATACTGGCAAGGGTTA
GATTCACTGTGTGCAGTATTTGTTCACCTTAATTTCAATGATGAGCCAAGAGCATGGGCT
TCTTTGTCACAATTCATTGATAAATACCTGCACAAGTTCTTCCTCAAAGACAATTCCGCC
ATAATTCAAGAATATCTACTGGTCTTTTCACACTTGCTCTCATTTCATGACCCAATGTTA
TACTGTCATATGACAGAGATCGGTTTTATTCCCGACTTGTATGCAATTCCATGGTTTCTT
ACAATGTTTGCCCATGTTTTTCCACTCCATAAGATAGTCCACCTCTGGGATACTTTATTA
CTTGGAAATTCTTCCTTTCCACTTTGCATCGGGGTTGCTATTTTGCAACAACTAAGAGGA
CAACTGCTGGAAAGTGACTTTAACGAATGCATCCTGCTCTTTTCAGACCTTCCTGAAATA
GACATTGATGGAGTGGTTAAGAAATCAATCCAAGTGTTCTGCCAGTCTCCAAAAAGCTCA
ACATTCAGGGTCCACGCACGTACTGAAGAAAAAAGCAAGCGCGAGCCAACGTCTTATTAC
ACGGAAGATTACAACACTTTACCTAAAACTGAATTATCAGAAACAGCGATACCACTCTCA
GAACTAAAGCAAGAAGTCTGCTGCAGGATTTCTGCTGATGATTTAATTCAGCTTGGTGAA
CTACAGGGAGCTAACAATTCCAAAACACCAGCAAAATTGACAAAGTCAAGTAAACCTAGG
ATTTTTGTCATCGATATCCGTTCTTCAGATGAATTTGTCCGTGGATCTATCCCGGGCAGT
TATAACTTCCCATACATTACTGATAAACCAATCGCCCAGTTGATTCAGACAGTTTTGAAA
CAAAAGCCAAAAGTAGTGGTGGTTGTGGGAAATAAAGGTTCTCGAGAAGATAGAGAATTT
TGCCTCGAACTTCTGAAAGCAGGCTTAATAGGTGTTTGTGTGCTACATGGCGGCATTGAT
ATACTAAAACCTATAGGTGTTTTGACAGTGCCATCTCAGTGA
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[39-208] 2.86E-8 |
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[366-523] 2.54E-30 - T[501-613] 3.4E-30 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[375-586] 1.7E-41 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[378-563] 30.325 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[383-583] 3.2E-39 |
| Gene3D |
Rhodanese-like_dom_sf (IPR036873) - T[677-783] 3.1E-11 |
| SMART |
Rhodanese-like_dom (IPR001763) - T[687-788] 7.8E-4 |
| SUPERFAMILY |
Rhodanese-like_dom_sf (IPR036873) - T[692-780] 2.49E-12 |
| ProSiteProfiles |
Rhodanese-like_dom (IPR001763) - T[697-791] 12.085 |
| Pfam |
Rhodanese-like_dom (IPR001763) - T[697-780] 2.1E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBCK_HUMAN | 42.905 % | 638 | 0 |