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- Transcript 'Cisavi.CG.ENS81.R19....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R19.3127320-3132707.17527.t
Possible name(s)
GSPT1; GSPT2; HBS1L
Gene model
Location
R19 [3,127,319 / 3,132,662]
Amino acid sequence
Length: 481
>Cisavi.CG.ENS81.R19.3127320-3132707.17527.p
FTNLNIGAKPFVPNINAAVFVPGKKAEPAENFPESQEQAPDTNSVVEMTIENPPVLCEHV
ATEMKGEVPEVVDEVMAEEEPQAKMEEEQVVPVPQASLPEELSSKEEHINVVFIGHVDAG
KSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLWCSQADVAVLVISARRGEFETGF
ERGGQTREHAMLAKTAGVQHLIVLINKMDDSTVKWSEERYKECKEKLIPFLKKVGFNPKK
DIHFMPCSGLTGANLKKSDYDNHPWYTGLPLIPYLDNLPTLTRSGDGPLRLPIVDKYKDM
GVIVLGKVESGSVYKGQMLVMQPNRRKVKVLGIQSDEVETELAIAGENVKVRVDSIEEEE
ISKGFVLCTPDNLCSTGQLFDAQIAIIEYKSIICAGYSAILHIHTCIEEVVIKQLICLLD
RKTGEKKKTRFVKQDQTVIARLQTQGPVCIESFKTFPQMGRFTLRDEGRTIAIGKVLKVL
E
Nucleotide sequence
Length: 2,267
>Cisavi.CG.ENS81.R19.3127320-3132707.17527.t
TTTACCAATCTCAACATCGGGGCAAAACCGTTTGTGCCAAACATCAACGCCGCTGTCTTC
GTTCCTGGCAAAAAAGCGGAGCCGGCTGAAAATTTTCCAGAATCACAGGAACAGGCTCCG
GATACAAACTCCGTAGTAGAAATGACGATCGAAAACCCACCCGTTTTATGTGAACATGTC
GCCACTGAAATGAAGGGGGAAGTCCCTGAGGTGGTTGATGAGGTTATGGCTGAAGAAGAG
CCGCAAGCGAAGATGGAAGAGGAGCAGGTTGTTCCTGTACCACAAGCGTCGCTTCCTGAA
GAACTTTCCTCCAAAGAAGAGCACATCAACGTGGTCTTCATTGGCCACGTCGACGCCGGA
AAGTCCACAATCGGGGGTCAGATCATGTACCTCACCGGAATGGTGGACAAACGCACGTTG
GAAAAGTACGAAAGGGAGGCAAAGGAGAAAAACAGAGAGACTTGGTACTTGTGGTGCTCT
CAAGCCGATGTCGCTGTTTTGGTCATTTCAGCTAGGCGTGGAGAGTTCGAGACCGGGTTC
GAGAGAGGCGGACAAACCCGGGAACATGCCATGCTTGCGAAGACTGCTGGTGTGCAACAC
CTCATTGTTCTTATCAACAAAATGGACGACTCAACTGTAAAGTGGAGCGAAGAGCGATAT
AAGGAGTGCAAGGAAAAGTTGATACCGTTCTTGAAGAAGGTCGGTTTCAACCCGAAAAAA
GACATTCACTTCATGCCCTGCTCTGGTCTTACCGGGGCCAACCTTAAGAAGTCTGACTAC
GACAATCACCCATGGTACACTGGGCTTCCTCTTATCCCATATTTAGATAACCTTCCCACT
CTGACAAGATCCGGAGACGGACCGTTACGTCTTCCCATTGTCGACAAGTACAAGGACATG
GGTGTGATTGTACTAGGGAAGGTGGAATCTGGAAGTGTGTACAAAGGTCAAATGCTTGTC
ATGCAGCCTAATAGGAGAAAAGTAAAAGTTCTTGGGATTCAATCCGATGAAGTGGAAACA
GAATTGGCGATTGCAGGCGAGAACGTGAAAGTTCGAGTCGATTCAATTGAAGAGGAAGAA
ATTTCAAAGGGTTTCGTTCTCTGCACTCCAGATAACCTGTGCAGCACAGGTCAATTGTTT
GACGCGCAAATCGCCATAATCGAGTATAAATCAATTATTTGTGCCGGATACAGTGCTATT
CTCCACATACACACCTGTATTGAAGAAGTTGTCATAAAGCAGCTTATTTGCCTATTAGAT
CGAAAAACCGGAGAAAAGAAAAAGACAAGATTTGTTAAGCAGGACCAAACAGTGATCGCG
AGACTGCAGACTCAAGGCCCAGTGTGCATTGAAAGTTTCAAGACGTTCCCACAAATGGGG
AGGTTCACACTGCGTGACGAGGGTCGTACCATCGCGATCGGCAAAGTATTAAAAGTTCTC
GAGTAAACAAACCGGCCGAAAAGTACAGCAAGATTTTATTTTCTACCGCCAGCTATTTAT
TACGTAATAGTAACAAAGTTAAGGAACGTTGAACGGGTGAAAAAATGCCAACATTTCGGG
GTAAACTTGAATCTCTAGTTTGTGGTTCAGAATTGACACCATGTATTTCTATTCGTTTAA
TTCAAATATGTTTACCATGTTGTGCGTTCCATCCTATGTTCACCACAGCCACAACCATTC
TGTCCTAACATGAACTATACGAGCATGAATCGGTGTAAAATTGTTTTCATTTTTTTGTCG
CTTTGCCTCCCCAAAATGCTGCTACGGTATCCAATTCACCCAAACAGACGTTACTTCCTT
CCAATACCGGCTTAATCCTATGGATTATACTGTGGACTAGGATTTGTGGAAACCCAATGG
TTTTTCTTCAAAAATTTCTGATCCACTCTTAAGTGGTTTACGAAAATTTTCTTTTCATTG
TACAAATGCAATTTTGAGCGTCCAGTGCCCAAAATTATTGCATGCTCCCACCCCAAAATG
CAAAAAGTAGGAATCATTTCAGCTTTAGTGCCTTCCTTTTGCTTCGACATTTGTTTCCGC
AGTGTTTTGTGTATATGGGTTTTGTTTTGCAATGTGATAGACTTTCGGTAACTTCTGTCT
CCAGAACATGCCTCAAAATGTAACAATGTGTTTTGAGACGCATTTAATAGTTATAAAATG
TACAGAATTTGGAGCGTTTTCAAAGATACTGAAATTCCTGTTGACAAAATATGGACCAAT
ATTTCAGTGGTGCTTAACTTTTTTCGAATAATTTGGTCTTGGGCTCT
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[105-301] 2.61E-38 |
| Pfam |
TF_GTP-bd_dom (IPR000795) - T[107-144] 2.3E-8 - T[160-256] 5.5E-14 |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[283-373] 4.57E-22 |
| Pfam |
Transl_elong_EFTu/EF1A_C (IPR004160) - T[378-479] 1.3E-29 |
| SUPERFAMILY |
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[380-480] 1.83E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HBS1L_HUMAN | 35.714 % | 266 | 9.14E-82 |
| ERF3A_HUMAN | 67.5 % | 598 | 0 |
| ERF3B_HUMAN | 56.794 % | 606 | 0 |