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  1. Transcript 'Cisavi.CG.ENS81.R19....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R19.3127320-3132707.17528.t

Possible name(s)

GSPT1; GSPT2; HBS1L

Location

R19 [3,127,698 / 3,132,707]

Sequences

Amino acid sequence

Length: 454

>Cisavi.CG.ENS81.R19.3127320-3132707.17528.p
AWDDGAANGNDVTSSFTNLNIGAKPFVPNINAAVFVPGKKAEPAENFPESQEQAPDTNSM
EEEQVVPVPQASLPEELSSKEEHINVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYER
EAKEKNRETWYGASQADVAVLVISARRGEFETGFERGGQTREHAMLAKTAGVQHLIVLIN
KMDDSTVKWSEERYKECKEKLIPFLKKVGFNPKKDIHFMPCSGLTGANLKKSDYDNHPWY
TGLPLIPYLDNLPTLTRSGDGPLRLPIVDKYKDMGVIVLGKVESGSVYKGQMLVMQPNRR
KVKVLGIQSDEVETELAIAGENVKVRVDSIEEEEISKGFVLCTPDNLCSTGQLFDAQIAI
IEYKSIICAGYSAILHIHTCIEEVVIKQLICLLDRKTGEKKKTRFVKQDQTVIARLQTQG
PVCIESFKTFPQMGRFTLRDEGRTIAIGKVLKVL

Nucleotide sequence

Length: 1,810

>Cisavi.CG.ENS81.R19.3127320-3132707.17528.t
GCATGGGATGATGGGGCGGCGAATGGAAATGACGTAACGTCCTCTTTTACCAATCTCAAC
ATCGGGGCAAAACCGTTTGTGCCAAACATCAACGCCGCTGTCTTCGTTCCTGGCAAAAAA
GCGGAGCCGGCTGAAAATTTTCCAGAATCACAGGAACAGGCTCCGGATACAAACTCCATG
GAAGAGGAGCAGGTTGTTCCTGTACCACAAGCGTCGCTTCCTGAAGAACTTTCCTCCAAA
GAAGAGCACATCAACGTGGTCTTCATTGGCCACGTCGACGCCGGAAAGTCCACAATCGGG
GGTCAGATCATGTACCTCACCGGAATGGTGGACAAACGCACGTTGGAAAAGTACGAAAGG
GAGGCAAAGGAGAAAAACAGAGAGACTTGGTACGGTGCTTCTCAAGCCGATGTCGCTGTT
TTGGTCATTTCAGCTAGGCGTGGAGAGTTCGAGACCGGGTTCGAGAGAGGCGGACAAACC
CGGGAACATGCCATGCTTGCGAAGACTGCTGGTGTGCAACACCTCATTGTTCTTATCAAC
AAAATGGACGACTCAACTGTAAAGTGGAGCGAAGAGCGATATAAGGAGTGCAAGGAAAAG
TTGATACCGTTCTTGAAGAAGGTCGGTTTCAACCCGAAAAAAGACATTCACTTCATGCCC
TGCTCTGGTCTTACCGGGGCCAACCTTAAGAAGTCTGACTACGACAATCACCCATGGTAC
ACTGGGCTTCCTCTTATCCCATATTTAGATAACCTTCCCACTCTGACAAGATCCGGAGAC
GGACCGTTACGTCTTCCCATTGTCGACAAGTACAAGGACATGGGTGTGATTGTACTAGGG
AAGGTGGAATCTGGAAGTGTGTACAAAGGTCAAATGCTTGTCATGCAGCCTAATAGGAGA
AAAGTAAAAGTTCTTGGGATTCAATCCGATGAAGTGGAAACAGAATTGGCGATTGCAGGC
GAGAACGTGAAAGTTCGAGTCGATTCAATTGAAGAGGAAGAAATTTCAAAGGGTTTCGTT
CTCTGCACTCCAGATAACCTGTGCAGCACAGGTCAATTGTTTGACGCGCAAATCGCCATA
ATCGAGTATAAATCAATTATTTGTGCCGGATACAGTGCTATTCTCCACATACACACCTGT
ATTGAAGAAGTTGTCATAAAGCAGCTTATTTGCCTATTAGATCGAAAAACCGGAGAAAAG
AAAAAGACAAGATTTGTTAAGCAGGACCAAACAGTGATCGCGAGACTGCAGACTCAAGGC
CCAGTGTGCATTGAAAGTTTCAAGACGTTCCCACAAATGGGGAGGTTCACACTGCGTGAC
GAGGGTCGTACCATCGCGATCGGCAAAGTATTAAAAGTTCTCGAGTAAACAAACCGGCCG
AAAAGTACAGCAAGATTTTATTTTCTACCGCCAGCTATTTATTACGTAATAGTAACAAAG
TTAAGGAACGTTGAACGGGTGAAAAAATGCCAACATTTCGGGGTAAACTTGAATCTCTAG
TTTGTGGTTCAGAATTGACACCATGTATTTCTATTCGTTTAATTCAAATATGTTTACCAT
GTTGTGCGTTCCATCCTATGTTCACCACAGCCACAACCATTCTGTCCTAACATGAACTAT
ACGAGCATGAATCGGTGTAAAATTGTTTTCATTTTTTTGTCGCTTTGCCTCCCCAAAATG
CTGCTACGGTATCCAATTCACCCAAACAGACGTTACTTCCTTCCAATACCGGCTTAATCC
TATGGATTATACTGTGGACTAGGATTTGTGGAAACCCAATGGTTTTTCTTCAAAAATTTC
TGATCCACTC

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[80-275] 2.26E-38
Pfam
TF_GTP-bd_dom (IPR000795) - T[82-119] 2.3E-8 - T[127-230] 3.1E-15
SUPERFAMILY
Transl_B-barrel_sf (IPR009000) - T[257-347] 4.16E-22
Pfam
Transl_elong_EFTu/EF1A_C (IPR004160) - T[352-453] 1.1E-29
SUPERFAMILY
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[354-453] 2.88E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HBS1L_HUMAN 36.076 % 268 7.86E-83
ERF3A_HUMAN 67.5 % 600 0
ERF3B_HUMAN 65.695 % 593 0





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