- Transcript 'Cisavi.CG.ENS81.R9.2...' >
- Transcript 'Cisavi.CG.ENS81.R193...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R193.25995-36850.10246.t
Possible name(s)
IPO13; XPO1; XPO5
Gene model
Location
R193 [26,036 / 36,850]
Amino acid sequence
Length: 1,117
>Cisavi.CG.ENS81.R193.25995-36850.10246.p
PIAMSVNVTQQHGQQLLDFGQKLDISLLDSVVGCLYNGEGQSQRIAENILTALKEHPESW
TRVDTILEYSQNQQTKYYALQILENVIKTRWKVLPRNQCDGIKKYIVALIIKTSSDAALS
EKEKTYLGKLNMILVQILKQDWPKNWPTFISDIVGASRTNESLCQNNMVILKLLSEEVFD
FSQDQMTQVKAKHLKDSMCNEFSDIFQLCQFVMDNSQNAPLVNATLSTLLCFLNWIPLGY
IFETELITQLIYKFLNLPMFRNVTLKCITEIAGVSVAGKYDEQFLKLFSHTMQQLKQMLP
PNVNMKAAYASGSDTEQNFIQNLALFLCTFLKEHGQLVEKEDLRPNLLFKTEVHKLPIES
HKVITYLPHRLLVTLSTYLRLRKLRSSRSAWNTGTPSLLSCTGRIRFLPPQLLSHPPIPL
VKILPCLIDPTPTIFSLLYVFETANIFLLVVENEQGEVVREFMKDTDSINLYKNMRETLG
RRPVLFMCSASICFVLVALARLYLTHLDYVDTERIMTEKLHNQVNGSEWSWKNLNTLCWA
IGSISGAMHEEDEKRFLVTVIRDLLGLCEMKRGKDNKAIIASNIMYVVGQYPRFLRAHWR
FLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQMQAGEVMPFIEEILSNIST
IICDLQPQQVHTFYEAVGFMISAQTDSVVQEHLIEKYMLLPNQVWDNIIQKATKDVDILK
DPATVKQLGSILKTNVRAGKAVGHSFVQQLGRIYLDMLNVYKCLSENISSAIQQNGEGVM
KQPLIRSMRTVKKETLKISGWVSRATDPEMVAENFVPPLLEAVLIDYRSNVPAAREPEVL
STIATIVNKLEGAITKEIGQIFDAVFECTLEMINKDFEEFPEYRTNFFLLLQAVNNHCFP
ALLSIPQPQFKLVLDSIIWAFKHTMRNVAHTVTTTFVFLGLSILYQLLQNITSVDDAAQS
FYQMYFTDILQHVFSVGTDTSHTAGLTMHASILAYMFSLVEQNKITVPLHANQPNNLVFV
QEYVANLLKTAFPHLQDAQIKLFVRGLFSLNHDIALFKDHLRDFLVQIKEFAGEDTTDLF
LEEREATLVKAQEEKRRAQMAVPGIVNPHEVTEEMQD
Nucleotide sequence
Length: 3,627
>Cisavi.CG.ENS81.R193.25995-36850.10246.t
CCGATTGCCATGTCTGTCAACGTGACCCAACAACATGGCCAACAACTTCTTGACTTTGGC
CAGAAGTTGGATATTTCACTGCTAGACAGTGTAGTGGGTTGCTTGTACAATGGTGAAGGC
CAATCTCAACGGATTGCCGAAAACATACTCACCGCACTAAAGGAGCACCCCGAATCATGG
ACCCGTGTGGATACCATTCTAGAATATTCCCAAAACCAACAAACAAAGTATTATGCTTTA
CAAATCCTGGAAAATGTTATCAAAACCCGATGGAAAGTTTTGCCAAGAAACCAATGTGAC
GGCATCAAAAAATACATCGTTGCACTTATTATAAAAACGTCATCGGACGCCGCTTTAAGT
GAAAAGGAGAAAACATACCTTGGAAAACTAAACATGATACTTGTACAAATACTGAAACAA
GATTGGCCTAAGAACTGGCCCACATTTATTAGCGACATTGTGGGTGCAAGCAGAACGAAT
GAGTCTTTATGCCAAAACAATATGGTCATACTGAAACTGCTCAGTGAAGAGGTGTTTGAT
TTTTCTCAAGACCAAATGACCCAAGTAAAGGCGAAACACCTAAAAGACAGCATGTGTAAT
GAGTTTTCTGATATATTTCAACTTTGCCAGTTTGTAATGGACAACTCCCAGAATGCACCA
CTTGTAAACGCAACGCTAAGCACTCTTCTGTGCTTTCTGAACTGGATTCCTCTAGGTTAT
ATATTTGAAACTGAACTTATTACCCAGCTTATTTATAAGTTTTTAAACCTACCCATGTTT
CGAAATGTGACGCTAAAGTGCATCACCGAAATAGCTGGGGTAAGTGTTGCTGGAAAATAC
GATGAACAGTTTTTAAAACTCTTTTCTCATACAATGCAACAACTAAAACAGATGTTGCCA
CCAAATGTGAACATGAAGGCTGCGTACGCCAGTGGTTCAGACACTGAGCAAAACTTTATC
CAAAATTTAGCCTTATTTTTATGCACCTTTCTCAAAGAACACGGCCAACTTGTGGAAAAA
GAAGATCTACGGCCAAACTTACTGTTTAAAACAGAAGTACATAAATTGCCTATAGAATCA
CACAAAGTCATAACCTATTTGCCACACAGGCTCTTGGTTACCTTGTCCACATATCTGAGG
TTGAGGAAACTGAGATCTTCAAGATCTGCTTGGAATACTGGAACTCCCTCTCTGCTGAGC
TGTACAGGGAGAATCCGTTTTCTCCCACCCCAACTCTTATCGCATCCACCGATCCCATTA
GTAAAAATTCTACCTTGTTTAATTGATCCAACACCAACCATATTCTCTTTGCTTTATGTG
TTTGAGACTGCCAATATATTTTTGTTGGTCGTGGAGAACGAACAGGGAGAAGTTGTTCGG
GAGTTCATGAAGGACACCGATTCTATCAATCTGTATAAAAATATGAGGGAAACGCTAGGT
AGGCGACCTGTGTTGTTCATGTGTTCTGCCTCAATTTGTTTTGTTTTGGTGGCACTTGCA
CGATTATACCTTACCCACTTGGACTATGTGGACACTGAACGAATCATGACAGAGAAACTG
CATAATCAGGTGAATGGGTCAGAATGGTCTTGGAAGAACCTCAACACATTGTGCTGGGCC
ATCGGTAGCATCAGTGGTGCGATGCATGAAGAGGATGAGAAACGTTTCCTCGTCACCGTT
ATCAGAGATTTACTTGGTTTGTGTGAGATGAAGCGTGGTAAGGACAATAAAGCAATCATT
GCATCCAACATCATGTACGTGGTTGGACAATACCCACGATTTCTTCGCGCGCACTGGCGA
TTCCTCAAAACCGTTGTCAACAAGCTATTTGAATTCATGCACGAAACCCACGACGGTGTG
CAAGACATGGCGTGCGATACTTTCATCAAAATCGCACAAAAGTGTCGGCGACATTTCGTG
CAAATGCAAGCGGGTGAGGTGATGCCGTTTATCGAGGAAATCCTCTCAAACATCAGCACA
ATCATATGTGACCTGCAGCCACAACAGGTCCACACCTTCTATGAAGCTGTGGGGTTCATG
ATCAGTGCTCAAACTGATTCCGTCGTTCAAGAACATTTGATCGAAAAGTACATGTTGCTT
CCAAACCAGGTTTGGGACAATATCATTCAGAAAGCCACCAAAGATGTAGACATTCTCAAA
GACCCAGCTACAGTGAAACAGTTAGGAAGCATCCTTAAAACCAATGTCCGGGCTGGCAAG
GCTGTTGGTCATAGCTTTGTGCAACAGCTCGGTCGTATCTACCTTGACATGCTGAACGTG
TACAAGTGCCTGAGTGAGAACATCTCGTCGGCCATCCAACAGAATGGGGAGGGTGTGATG
AAGCAGCCCCTCATACGAAGCATGCGCACTGTAAAGAAGGAAACCCTCAAAATATCGGGT
TGGGTCAGTCGAGCAACAGACCCGGAAATGGTTGCTGAGAACTTCGTTCCTCCGTTATTA
GAAGCGGTGCTGATAGATTACCGCAGCAACGTTCCTGCTGCCCGTGAACCTGAAGTGTTG
AGCACCATCGCTACTATCGTTAATAAGCTAGAGGGTGCTATTACGAAAGAGATTGGTCAA
ATATTCGATGCGGTGTTCGAATGTACACTCGAAATGATAAATAAAGATTTTGAAGAATTC
CCGGAATATCGAACTAATTTCTTTTTACTCTTACAAGCTGTGAACAACCACTGCTTCCCA
GCGCTACTAAGCATACCTCAACCACAGTTCAAACTTGTGCTCGACTCCATTATATGGGCG
TTCAAGCACACCATGAGAAATGTTGCTCATACAGTAACCACCACCTTTGTTTTCCTAGGA
CTGAGTATACTCTACCAACTGCTGCAAAACATCACGTCGGTGGACGATGCGGCCCAGAGC
TTCTATCAAATGTATTTCACCGATATCTTACAGCATGTATTCAGTGTGGGCACAGATACA
TCACACACTGCAGGTTTGACTATGCACGCTTCAATACTTGCTTACATGTTCAGCTTAGTG
GAACAAAACAAGATCACAGTACCGCTGCATGCAAATCAACCAAATAACCTGGTTTTTGTT
CAAGAATATGTCGCCAATTTATTAAAGACTGCTTTTCCACATTTGCAAGACGCCCAAATC
AAGTTGTTTGTTCGAGGCCTCTTCAGTCTAAATCATGATATCGCTTTGTTTAAAGACCAT
CTAAGAGATTTTTTGGTTCAAATCAAGGAATTTGCCGGTGAAGACACCACCGATCTGTTT
CTCGAAGAGCGGGAAGCCACATTAGTGAAAGCGCAAGAGGAGAAACGTCGGGCACAGATG
GCCGTCCCCGGTATTGTTAACCCACACGAGGTCACTGAAGAAATGCAGGACTGAACCTTG
GGGTTGTAACGTAACATTGACGCGCAACGCCTGCTGCCGTGCGACTTGGCAGTGCCGAGA
GGGTTACGGCAGTTTTCTACTTTATATTTCTCACTGATTCTTTTCTATGGAAAGCTGTAA
ATGACCTTTACATGGTTGGTTGTGATTCCACTTAGTACGGGTAAACGCGACAATCAACCC
TAAAAGTGGTTGTATGACTTGTATAAAATGACTTCGTCACAAACTATTGTGTTTGGAATC
TTTTTTCTCATTTTATTTTTGTTTAGT
| Gene3D |
ARM-like (IPR011989) - T[2-365] 3.5E-120 - T[414-743] 6.2E-126 - T[744-1113] 5.8E-151 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[29-338] 1.44E-102 - T[415-485] 1.44E-102 - T[513-746] 1.44E-102 - T[748-1073] 1.84E-110 - T[812-1079] 1.44E-102 |
| ProSiteProfiles |
Importin-beta_N (IPR001494) - T[46-112] 14.484 |
| SMART |
Importin-beta_N (IPR001494) - T[46-112] 2.6E-11 |
| Pfam |
Importin-beta_N (IPR001494) - T[46-111] 2.4E-12 |
| Pfam |
Exportin-1/Importin-b-like (IPR013598) - T[125-268] 4.1E-40 |
| SMART |
CRM1_C_dom (IPR014877) - T[749-1073] 2.6E-204 |
| Pfam |
CRM1_C_dom (IPR014877) - T[749-1073] 2.2E-122 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| XPO1_HUMAN | 74.097 % | 1646 | 0 |