- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R193...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R193.25995-36850.10248.t
Possible name(s)
IPO13; XPO1; XPO5
Gene model
Location
R193 [27,563 / 35,218]
Amino acid sequence
Length: 1,041
>Cisavi.CG.ENS81.R193.25995-36850.10248.p
IAENILTALKEHPESWTRVDTILEYSQNQQTKYYALQILENVIKTRWKVLPRNQCDGNFL
VMFLIQLFAFNTNLTAEKTYLGKLNMILVQILKQDWPKNWPTFISDIVGASRTNESLCQN
NMVILKLLSEEVFDFSQDQMTQVKAKHLKDSMCNEFSDIFQLCQFVMVSCVILTNDFNAP
LVNATLSTLLCFLNWIPLGYIFETELITQLIYKFLNLPMFRNVTLKCITEIGEISCFFCV
ICNFKMLYLQLGLTLFQMLPPNVNMKAAYASGSDTEQNFIQNLALFLCTFLKEHGQLVEK
EDLRPNLVDALGYLVHISEVEETEIFKICLEYWNSLSAELYRENPFSPTPTLIASTDPIV
PARRQIYLPILSRVSWSMVGITLLKAENSNDIKILPCLIDPTPTIFSLLYVFETANIFCQ
ADFIYQKLTHTLFKWANINLNLVRLVMISRMAKPEEVLVVENEQGEVVREFMKDTDSINL
YKNMRETLVYLTHLDYVDTERIMTEKLHNQPSIPQVNGSEWSWKNLNTLCWAIGSISGAM
HEEDEKRFLVTVIRDLLGLCEMKRGKDNKAIIASNIMYVVGQYPRFLRAHWRFLKTVVNK
LFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQMQAGEVMPFIEEILSNISTIICDLQPQ
QLGTLVYESSFIQKCNPANACENLCTHFLHLFFYFYLFNSFLSQVHTFYEAVGFMISAQT
DSVWDNIIQKATKDVDILKDPATVKQLGSILKTNVRAGKAVGHSFVQQLGRIYLDMLNVY
KCLSENISSAIQQNGEGVMKQPLIRSMRTVKKETLKLNIGLGHYNSAQLKISMISLIMFS
LSWSFLYKPPLITIRFTSLSSHSHYLQVAENFVPPLLEAVLIDYRSNVPAAREPEVLSTI
ATIVNKLEGAITKEIGQIFDAVFECTLEMINKDFEEFPEYRTNFFLLLQAVNNHCFPALL
SIPQPQFKLVLDSIIWAFKHTMRNVAHTGLSILYQLLQNITSVDDAAQSFYQMYFTDILQ
HVFSVGTDTSHTAGISFVLVV
Nucleotide sequence
Length: 3,123
>Cisavi.CG.ENS81.R193.25995-36850.10248.t
ATTGCCGAAAACATACTCACCGCACTAAAGGAGCACCCCGAATCATGGACCCGTGTGGAT
ACCATTCTAGAATATTCCCAAAACCAACAAACAAAGTATTATGCTTTACAAATCCTGGAA
AATGTTATCAAAACCCGATGGAAAGTTTTGCCAAGAAACCAATGTGACGGTAACTTTTTA
GTGATGTTTTTAATTCAACTGTTTGCTTTTAATACAAATTTAACTGCTGAGAAAACATAC
CTTGGAAAACTAAACATGATACTTGTACAAATACTGAAACAAGATTGGCCTAAGAACTGG
CCCACATTTATTAGCGACATTGTGGGTGCAAGCAGAACGAATGAGTCTTTATGCCAAAAC
AATATGGTCATACTGAAACTGCTCAGTGAAGAGGTGTTTGATTTTTCTCAAGACCAAATG
ACCCAAGTAAAGGCGAAACACCTAAAAGACAGCATGTGTAATGAGTTTTCTGATATATTT
CAACTTTGCCAGTTTGTAATGGTAAGTTGTGTAATACTTACAAATGACTTTAATGCACCA
CTTGTAAACGCAACGCTAAGCACTCTTCTGTGCTTTCTGAACTGGATTCCTCTAGGTTAT
ATATTTGAAACTGAACTTATTACCCAGCTTATTTATAAGTTTTTAAACCTACCCATGTTT
CGAAATGTGACGCTAAAGTGCATCACCGAAATAGGTGAGATATCATGTTTCTTTTGTGTA
ATTTGCAATTTTAAAATGCTTTATTTGCAGCTGGGTTTAACACTTTTTCAGATGTTGCCA
CCAAATGTGAACATGAAGGCTGCGTACGCCAGTGGTTCAGACACTGAGCAAAACTTTATC
CAAAATTTAGCCTTATTTTTATGCACCTTTCTCAAAGAACACGGCCAACTTGTGGAAAAA
GAAGATCTACGGCCAAACTTAGTTGATGCTCTTGGTTACCTTGTCCACATATCTGAGGTT
GAGGAAACTGAGATCTTCAAGATCTGCTTGGAATACTGGAACTCCCTCTCTGCTGAGCTG
TACAGGGAGAATCCGTTTTCTCCCACCCCAACTCTTATCGCATCCACCGATCCCATTGTT
CCAGCCAGAAGACAAATCTACCTCCCGATTCTATCACGGGTAAGTTGGAGCATGGTTGGT
ATAACATTGCTTAAAGCGGAAAACAGCAATGATATAAAAATTCTACCTTGTTTAATTGAT
CCAACACCAACCATATTCTCTTTGCTTTATGTGTTTGAGACTGCCAATATATTTTGTCAG
GCCGATTTTATATATCAGAAATTAACCCATACTTTGTTTAAGTGGGCCAACATCAACCTT
AACCTTGTCCGATTGGTGATGATTAGTCGGATGGCGAAACCAGAGGAAGTGTTGGTCGTG
GAGAACGAACAGGGAGAAGTTGTTCGGGAGTTCATGAAGGACACCGATTCTATCAATCTG
TATAAAAATATGAGGGAAACGCTAGTATACCTTACCCACTTGGACTATGTGGACACTGAA
CGAATCATGACAGAGAAACTGCATAATCAGCCGTCCATTCCACAGGTGAATGGGTCAGAA
TGGTCTTGGAAGAACCTCAACACATTGTGCTGGGCCATCGGTAGCATCAGTGGTGCGATG
CATGAAGAGGATGAGAAACGTTTCCTCGTCACCGTTATCAGAGATTTACTTGGTTTGTGT
GAGATGAAGCGTGGTAAGGACAATAAAGCAATCATTGCATCCAACATCATGTACGTGGTT
GGACAATACCCACGATTTCTTCGCGCGCACTGGCGATTCCTCAAAACCGTTGTCAACAAG
CTATTTGAATTCATGCACGAAACCCACGACGGTGTGCAAGACATGGCGTGCGATACTTTC
ATCAAAATCGCACAAAAGTGTCGGCGACATTTCGTGCAAATGCAAGCGGGTGAGGTGATG
CCGTTTATCGAGGAAATCCTCTCAAACATCAGCACAATCATATGTGACCTGCAGCCACAA
CAGCTTGGTACCTTGGTGTATGAATCTTCGTTTATCCAAAAATGTAATCCTGCCAATGCA
TGTGAAAATTTGTGCACCCACTTTTTACACTTATTTTTTTATTTCTATTTATTTAATTCC
TTTCTATCCCAGGTCCACACCTTCTATGAAGCTGTGGGGTTCATGATCAGTGCTCAAACT
GATTCCGTTTGGGACAATATCATTCAGAAAGCCACCAAAGATGTAGACATTCTCAAAGAC
CCAGCTACAGTGAAACAGTTAGGAAGCATCCTTAAAACCAATGTCCGGGCTGGCAAGGCT
GTTGGTCATAGCTTTGTGCAACAGCTCGGTCGTATCTACCTTGACATGCTGAACGTGTAC
AAGTGCCTGAGTGAGAACATCTCGTCGGCCATCCAACAGAATGGGGAGGGTGTGATGAAG
CAGCCCCTCATACGAAGCATGCGCACTGTAAAGAAGGAAACCCTCAAACTGAATATCGGG
TTGGGTCATTACAATTCTGCACAATTAAAAATTTCCATGATTTCTTTAATAATGTTTTCC
CTGTCTTGGTCCTTCCTATACAAGCCACCACTCATCACAATTCGTTTCACCAGTTTGTCA
TCACATTCTCATTACCTCCAGGTTGCTGAGAACTTCGTTCCTCCGTTATTAGAAGCGGTG
CTGATAGATTACCGCAGCAACGTTCCTGCTGCCCGTGAACCTGAAGTGTTGAGCACCATC
GCTACTATCGTTAATAAGCTAGAGGGTGCTATTACGAAAGAGATTGGTCAAATATTCGAT
GCGGTGTTCGAATGTACACTCGAAATGATAAATAAAGATTTTGAAGAATTCCCGGAATAT
CGAACTAATTTCTTTTTACTCTTACAAGCTGTGAACAACCACTGCTTCCCAGCGCTACTA
AGCATACCTCAACCACAGTTCAAACTTGTGCTCGACTCCATTATATGGGCGTTCAAGCAC
ACCATGAGAAATGTTGCTCATACAGGACTGAGTATACTCTACCAACTGCTGCAAAACATC
ACGTCGGTGGACGATGCGGCCCAGAGCTTCTATCAAATGTATTTCACCGATATCTTACAG
CATGTATTCAGTGTGGGCACAGATACATCACACACTGCAGGTATTTCATTTGTGCTTGTT
GTA
| Gene3D |
ARM-like (IPR011989) - T[1-381] 1.7E-111 |
| ProSiteProfiles |
Importin-beta_N (IPR001494) - T[2-54] 9.78 |
| Pfam |
Importin-beta_N (IPR001494) - T[2-53] 6.5E-9 |
| SMART |
Importin-beta_N (IPR001494) - T[2-66] 1.8E-5 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[2-238] 1.2E-89 - T[303-344] 1.2E-89 - T[432-668] 1.2E-89 - T[707-765] 1.2E-89 - T[869-1033] 1.2E-89 |
| Pfam |
Exportin-1/Importin-b-like (IPR013598) - T[79-228] 1.6E-37 |
| SMART |
CRM1_C_dom (IPR014877) - T[768-1039] 3.0E-115 |
| Pfam |
CRM1_C_dom (IPR014877) - T[768-1035] 1.8E-89 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| XPO1_HUMAN | 71.686 % | 859 | 0 |