- Clone 'cibd070g17' >
- Clone 'cien221799' >
- Clone 'cicl077e23' >
- Clone 'cien87190' >
- Transcript 'Cisavi.CG.ENS81.R19....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R19.4764818-4767613.19480.t
Possible name(s)
POU4F1; POU4F2; POU4F3
Gene model
Location
R19 [4,764,817 / 4,767,613]
Amino acid sequence
Length: 408
>Cisavi.CG.ENS81.R19.4764818-4767613.19480.p
MFTNMLATHHHHRPPSPVPTVTTLNTSYGEQKYAPLHNAADAVRRHCMASPVAYSGNLFA
GFDESFLARQAEALAAVDYPGKNQFKPEPSNHSYYPPAPYATQQHTSSAVPPPVYSSMHP
PSAFHHSAALPGTLDTNDVIEQLGSSHCGLPTYQPPSFNSSVMMTSDMSSQPHYISHPAP
TYNPPNHFHPTSVMHSTSAATPISAPISTQAGKTCREPTTGRYKPHIITSYVPGSPQPSV
PSFSSNDYDADPRELEAFAERFKQRRIKLGVTQNDVGQALANLKLPGVGSLSQSTICRFE
SLTLSHNNMVALKPILITWLEKAEEEHRRKMENAAMGEKKRKRTSIAAPEKRSLEAYFAV
QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSAFNGDVIM
Nucleotide sequence
Length: 1,227
>Cisavi.CG.ENS81.R19.4764818-4767613.19480.t
ATGTTCACCAACATGCTAGCAACGCATCATCACCACAGACCGCCATCACCGGTACCAACA
GTTACCACCCTCAATACAAGTTACGGGGAGCAAAAATACGCCCCGCTCCACAACGCAGCG
GATGCCGTTCGTCGCCACTGTATGGCATCCCCGGTGGCTTATTCGGGCAACCTTTTCGCC
GGTTTCGATGAAAGTTTCCTTGCGCGTCAGGCTGAAGCCTTGGCCGCTGTCGATTACCCT
GGTAAAAACCAGTTCAAACCAGAACCGAGCAACCATAGCTACTACCCACCCGCCCCGTAC
GCGACACAACAACACACATCATCGGCAGTTCCTCCACCTGTTTATAGCTCCATGCATCCT
CCATCAGCTTTCCATCACTCAGCGGCGCTACCGGGTACCCTTGACACGAATGACGTCATC
GAACAACTTGGCTCAAGCCACTGTGGTCTTCCCACGTACCAGCCACCCTCCTTTAACTCA
TCCGTTATGATGACGTCAGATATGTCGTCACAGCCCCATTACATCTCCCACCCCGCTCCA
ACTTACAACCCACCGAATCATTTTCACCCCACGTCAGTCATGCATTCGACCAGCGCTGCC
ACGCCCATTTCTGCCCCAATCAGCACACAAGCAGGTAAGACTTGCCGAGAACCCACTACA
GGTAGATATAAGCCTCATATCATAACATCATATGTTCCAGGTTCACCTCAACCCAGCGTA
CCCAGCTTCAGTTCGAACGATTACGACGCTGATCCACGTGAACTTGAAGCCTTCGCCGAA
AGATTCAAGCAACGTCGCATTAAACTCGGGGTGACGCAAAATGATGTCGGACAGGCACTC
GCCAACCTCAAACTTCCTGGAGTCGGGTCGCTAAGTCAAAGCACAATATGCAGGTTCGAG
TCTCTTACCCTCAGCCATAATAATATGGTTGCTTTAAAGCCGATTCTGATCACGTGGTTG
GAAAAGGCGGAAGAGGAGCATCGACGGAAGATGGAAAACGCTGCAATGGGGGAGAAGAAG
AGAAAACGAACCTCAATAGCTGCTCCCGAGAAGCGATCCTTGGAGGCTTATTTCGCTGTA
CAGCCACGACCGTCCTCGGAGAAAATCGCCGCCATTGCCGAAAAACTTGACCTCAAGAAA
AATGTTGTGCGAGTGTGGTTTTGTAACCAGAGACAGAAACAAAAACGAATGAAGTTTTCC
GCCTTTAACGGGGATGTGATCATGTAG
| SUPERFAMILY |
Lambda_DNA-bd_dom_sf (IPR010982) - T[247-324] 6.25E-21 |
| ProSiteProfiles |
POU_dom (IPR000327) - T[247-324] 46.373 |
| SMART |
POU_dom (IPR000327) - T[247-324] 5.7E-49 |
| Pfam |
POU_dom (IPR000327) - T[252-324] 1.0E-28 |
| CDD |
Cro/C1-type_HTH (IPR001387) - T[259-301] 0.00758073 |
| ProSitePatterns |
POU_dom (IPR000327) - T[265-277] . - T[292-305] . |
| PRINTS |
POU (IPR013847) - T[266-283] 3.5E-34 - T[292-305] 3.5E-34 - T[308-323] 3.5E-34 - T[338-358] 3.5E-34 - T[373-388] 3.5E-34 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[336-397] 1.37E-15 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[337-397] 16.86 |
| SMART |
Homeobox_dom (IPR001356) - T[339-401] 1.4E-17 |
| Pfam |
Homeobox_dom (IPR001356) - T[340-396] 8.1E-17 |
| CDD |
Homeobox_dom (IPR001356) - T[340-398] 3.63691E-16 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[372-395] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PO4F2_HUMAN | 84.277 % | 280 | 4.09E-91 |
| PO4F3_HUMAN | 50 % | 288 | 2.73E-95 |
| PO4F1_HUMAN | 86.709 % | 279 | 1.69E-90 |