Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R19.5014338-5018076.19963.t

Possible name(s)

SEMA5A; UNC5B; UNC5C

Gene model

Cisavi.CG.ENS81.R19.5014338-5018076

Location

R19 [5,014,337 / 5,018,076]

Sequences

Amino acid sequence

Length: 207

>Cisavi.CG.ENS81.R19.5014338-5018076.19963.p
MAQLVMSVRNNDVIIAKSDVMKVHWSGEYTLDVAADITNCPDGRIKVYYKRPPCVPPSDI
IEVVAMGNDGNISLLTNHTLSGDENFVQFECSSIFKDLQSAVICFRYMTLGVALRTVCRQ
TNHSVEFNVSGSWTTWSYWSQCQRPCSETVSRRTRTCDNPKPMGMGKHCSKDSASNIDYE
FEESDVSNSECEFGTPMTSTNTSSCTC

Nucleotide sequence

Length: 895

>Cisavi.CG.ENS81.R19.5014338-5018076.19963.t
AGAAACCAACTCTGCTTCCAACGTCACCGTAAAAGTAACCAAGCGGCCCAAAATTAAGCT
GACAACCAAGGCAAAACACGAAGCTTCAACTACAGATGTCAAGGTATCAATTTCGTCGCC
AAACAACTTGTGCACATCGGATGTTGTTAGTCAATACCCTACGAAAGTTCAATTCGTTCG
AAGCAAAACAGTTGTCGTGTCAACTCGTGAGGTTGCTTTTCCACCGACGTCGGTTGTATT
CTTGTGTAATGTGTTCGACCAACCTGGTGAGTATATGGCTCAGCTGGTGATGTCTGTGAG
AAATAATGATGTCATCATCGCTAAAAGTGATGTCATGAAAGTGCACTGGAGCGGGGAATA
CACACTGGATGTGGCTGCCGATATAACCAATTGTCCAGATGGCCGGATAAAAGTTTATTA
CAAACGACCACCGTGTGTTCCACCCAGCGACATCATAGAGGTTGTTGCCATGGGTAACGA
CGGAAATATTTCACTCCTTACCAACCACACCCTTTCTGGTGATGAAAACTTTGTCCAATT
TGAATGTTCATCGATTTTCAAGGATTTACAAAGTGCAGTCATTTGCTTTCGCTACATGAC
CTTAGGTGTTGCACTAAGAACTGTGTGCAGACAAACCAATCATAGTGTGGAATTTAATGT
GTCTGGTTCATGGACCACATGGTCATACTGGAGTCAATGCCAACGGCCATGCAGTGAAAC
TGTTAGTAGACGCACAAGAACTTGTGATAATCCGAAACCTATGGGAATGGGAAAGCATTG
CTCTAAAGATTCTGCTTCCAATATTGACTATGAGTTTGAAGAATCTGATGTTTCAAACTC
TGAATGTGAGTTTGGGACTCCTATGACATCAACAAACACATCATCTTGCACATGT

InterProScan

SUPERFAMILY	TSP1_rpt_sf (IPR036383) - T[128-171] 5.49E-9
Gene3D	TSP1_rpt_sf (IPR036383) - T[130-191] 2.1E-10
ProSiteProfiles	TSP1_rpt (IPR000884) - T[130-170] 9.034
SMART	TSP1_rpt (IPR000884) - T[133-192] 1.4E-5
Pfam	TSP1_rpt (IPR000884) - T[135-174] 5.0E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value