- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Cisavi.CG.ENS81.R215...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R215.153603-166632.05087.t
Possible name(s)
HNRNPA1; HNRNPA1L2; HNRNPA3
Gene model
Location
R215 [153,602 / 166,632]
Amino acid sequence
Length: 451
>Cisavi.CG.ENS81.R215.153603-166632.05087.p
MKSEEMEDTNGADINEPEQQRKLFIGGLSFDTTNESLSKYFTKFGEVTDSVVMLDPKTKK
SRGFGFVTFKRIKMVDAVMEERPHKLDGRTVTPKRAVSREDSEKPGAHATVKKIFVGGIK
DDTNEQHLKDHFRKFGLVELVEVMEDRETRKKRGFAFVTFADHDPVDKIVSQKYHTINGH
NCEVRKALPKNELDKHKNKPGDRGPPPPEYMREREREHRRSPPPHAYSHDRYGPPAYDRY
SGHAPTYDRYPPSSGYDRGYPPPPRGYSEYDRYGPPPRDYASEYDRYRDYRDFPKEYSRS
SSSDYYRREAYSERPSSYDYPPREVAKEYSSASDRERAALPPSSAERERAYASSHAAASH
ERDLPRESRESRDPYPRSSSSAVPPEYEYSRKPEGSSNGYDYSSYMNSSSSYGPMKSSYS
SRSAAPYPSSYPSSGAAPSGSSGQYSSSARY
Nucleotide sequence
Length: 2,134
>Cisavi.CG.ENS81.R215.153603-166632.05087.t
GCCAAAAGCTAGTCGAAAAAAATCATATTTTTTTACAATCGTCGTTATTTACGAAATACT
ACTACATGAAATCAGAGGAAATGGAAGATACAAACGGAGCCGACATCAATGAGCCTGAAC
AACAAAGGAAGCTTTTCATCGGTGGTTTAAGTTTCGACACAACCAATGAGAGCCTCAGTA
AATATTTCACCAAGTTTGGTGAAGTAACAGATTCAGTCGTTATGTTAGATCCGAAGACAA
AAAAATCGAGAGGATTTGGGTTTGTGACTTTCAAAAGAATAAAAATGGTTGATGCAGTAA
TGGAAGAAAGACCACATAAGTTAGATGGAAGGACTGTAACACCAAAGCGTGCTGTGTCAA
GAGAGGATTCTGAGAAACCTGGCGCTCATGCAACTGTGAAAAAGATATTTGTTGGTGGAA
TCAAAGATGATACTAACGAACAACATTTGAAAGATCATTTCCGCAAGTTTGGACTAGTGG
AACTGGTTGAAGTTATGGAAGATCGTGAAACCAGAAAGAAGCGAGGATTTGCCTTCGTTA
CATTTGCCGACCATGATCCTGTGGACAAGATTGTCAGCCAGAAATACCACACAATTAACG
GCCACAACTGCGAAGTAAGGAAAGCTCTTCCCAAGAATGAACTTGACAAGCACAAGAATA
AACCTGGTGACAGAGGGCCCCCACCACCAGAATATATGAGAGAGCGGGAAAGAGAGCACA
GAAGGTCACCACCTCCGCATGCATATTCACATGATCGTTATGGCCCACCAGCATATGATC
GTTACAGTGGACATGCACCTACGTACGATCGTTATCCCCCAAGCAGTGGTTACGACCGTG
GTTACCCTCCGCCACCAAGAGGTTATTCGGAGTATGATCGGTATGGTCCCCCTCCCCGTG
ACTACGCGAGTGAATATGACCGTTACCGTGATTACAGGGACTTTCCCAAAGAATATTCTC
GAAGTTCTTCTTCAGACTACTACAGAAGGGAAGCATATTCTGAGCGCCCATCGTCATATG
ATTACCCTCCACGCGAAGTTGCAAAGGAATATTCATCTGCGTCTGATCGTGAGCGCGCTG
CTCTGCCACCCAGCTCAGCGGAACGGGAACGAGCATACGCCAGTTCACACGCTGCAGCGT
CTCATGAACGTGATCTTCCCCGTGAAAGCAGGGAATCGCGTGATCCATACCCACGAAGCT
CCAGTTCCGCGGTTCCACCTGAGTATGAATATTCCAGGAAACCTGAAGGAAGCAGCAACG
GGTATGACTACTCCTCCTACATGAACAGCAGCAGCAGTTACGGACCGATGAAGAGCAGTT
ACAGCTCCCGATCCGCCGCCCCTTACCCTAGTTCTTACCCGAGCTCTGGGGCAGCACCTA
GTGGGAGTTCTGGCCAGTATAGCTCAAGTGCGCGATATTAACTCGTGTGGCTGAGACAGA
ACAGAGCAGTTTCAATTGAGAAGAAACTTTTGTAAATAGACGTCGCATTATCACAAACAC
TGAACAATTTTCACTTCAATTATATCGCCAAGGAAAGTGATAAATGCCAAGAAAGTAATG
AGACACCCCCCGCACCATTTCCACCCCTCAGTACACCTGTAAGAAAAAGATACTTTTTAA
AAAATGGAGTCCAACAAGGAGATGTAAAAACTCAGATCAGCCACAACTGCATTGAGGCCA
TCTCTTATAGTGGTAAGCATGCGCAGTATTTCCAGCGACACTTTTAGTCGGAAAGTTACA
CTCTGTTCAGTGTAGCTTGGGTAAGCGATTTAGATGGGCAAGTGGAAAGCGTTTTATCAT
CCTTCGATCTGACCACTAGAGGTCCAGCTTTTTAAGCGAGTGAGGCTGATTGGGCTCCTG
CATATTAGACCATGTACATAAGTAATAACAGCAATGGTATCGAAACGAGTTAGAATTTTG
ATCATTTCCAAGTGAATGAATTGTGATATTTTAGTCGCTTTGTAATTATGCCACTGCCGC
TCGATGGCATTTTTATTTCATCTTCGCGTGAATGTAATTTGTGCTGTGTATTACACTTGC
ATAACGATCCAACTTTTCTCCCCCAAGTTATCAATTATTACTTTTATTCCCAATGAAATT
CTGGACTGATAATAAACACCTAACCCTTTGTAAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[16-102] 8.2E-26 - T[106-187] 5.2E-23 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[17-106] 2.42E-24 - T[106-206] 1.33E-23 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[21-104] 17.131 - T[112-189] 15.903 |
| SMART |
RRM_dom (IPR000504) - T[22-94] 1.1E-22 - T[113-185] 2.1E-20 |
| Pfam |
RRM_dom (IPR000504) - T[23-90] 6.1E-15 - T[114-177] 2.1E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ROA1_HUMAN | 69.663 % | 273 | 2.32E-88 |
| RA1L2_HUMAN | 69.101 % | 272 | 1.29E-88 |
| ROA3_HUMAN | 70.718 % | 271 | 2.7E-87 |