- Transcript 'KH2012:KH.L170.28.v3...' >
- Transcript 'Cisavi.CG.ENS81.R215...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R215.380006-398932.05668.t
Possible name(s)
ITGB1; ITGB6; ITGB7
Gene model
Location
R215 [381,634 / 398,092]
Amino acid sequence
Length: 780
>Cisavi.CG.ENS81.R215.380006-398932.05668.p
CTESKAKSCSDCISVPGCAWCEDSNYANNPNVLISRCDLPENLLTEGERCPENAIINPKS
NQSSPGGLASGNRPHSNVGESAVGTATQIRPQIIKAQVRPGDPLNIELSFKQAEDYPVDL
YYLLDLSKSMENDLNSLRALGRELGMSMQNITRDFRLGFGSFIDKTVMPYISTVPAKIKN
PCSDKAPCVPTYSFHNDLPLTPEIEAFVTSVNNVTHSSNLDNPEGGLDAMMQAIVCKESI
NWRKDATHLLVYSTDASFHYAGDGKLGGIVLPNDGRCYLNSKGHYYNANYMDYPSIGHLV
RKITSHSIQPIFAVTSNVIQTYTNLQKMIPKSVVGELSGDSSNIQLIQDAYNDTERIRWA
PIHWVLLEIKSPAEVSVSSQTAHCLDGSVPGLQCDGVKLGNVVNFTFTLSTEKCLTSPVQ
VIVSPYGYNEVVTINVESLCDCQCEETEAPTNNCSGHGNYQCGSCVCESGFTGLDCSCDQ
KDVLGIESYLANCTDPTTGVVCNRGGECQCGSCICTQYANKKIDGKYCECDNTSCKRAGG
KVCNGMGKCDCGDCICEPGWKGKACECTLEQALCYDHSDDALDSTKPCNGNGECECGQCV
CKLSQGGAKFRGQYCETKPLVVCDIHRDCIQCAWHTGNYNDTECKTQCMGYNVTVVSGMT
EDYQYSGYSQECRFTDLSDDCTYQANFEEIDGIIMVEVEPDKVCKTYANPVYIIIGIIAA
IVGIGLAILLIWKLLTSIKDAREYKNFQKESQNPKWQGGENPIFKKATSTFKNPMYSAGK
Nucleotide sequence
Length: 2,340
>Cisavi.CG.ENS81.R215.380006-398932.05668.t
TGCACGGAGAGCAAAGCCAAGTCATGCAGCGATTGCATAAGTGTCCCAGGGTGTGCATGG
TGTGAAGATTCTAACTATGCAAACAACCCGAATGTGTTGATTTCCCGATGTGATCTGCCT
GAGAACCTCCTAACTGAAGGGGAAAGATGTCCGGAAAATGCAATAATCAACCCGAAATCG
AACCAATCTTCTCCTGGTGGGTTGGCTTCTGGGAACAGACCACATTCAAACGTCGGAGAA
TCAGCTGTTGGAACTGCCACGCAGATACGACCACAGATCATAAAAGCACAAGTCAGACCA
GGTGATCCATTGAACATTGAGTTGTCATTCAAACAAGCTGAAGATTACCCAGTCGATCTA
TACTACCTCCTCGATCTCTCCAAATCCATGGAGAACGATCTCAACTCCCTTCGAGCCCTC
GGTCGCGAGCTTGGAATGAGCATGCAGAATATCACGAGGGATTTCCGACTTGGTTTCGGG
TCTTTTATTGATAAGACAGTAATGCCTTACATCTCCACTGTCCCTGCTAAGATAAAGAAC
CCGTGCAGTGATAAAGCTCCTTGCGTCCCAACATACAGCTTCCATAATGATCTACCATTG
ACGCCTGAAATTGAAGCGTTTGTGACATCAGTCAACAACGTAACTCATTCATCCAACTTG
GACAACCCTGAAGGCGGGCTCGACGCAATGATGCAAGCTATTGTGTGCAAGGAAAGCATC
AACTGGCGCAAAGACGCAACTCATCTCCTGGTATATTCCACCGACGCGAGTTTCCACTAC
GCAGGAGATGGGAAGTTGGGAGGAATCGTTCTTCCTAATGATGGGAGGTGTTATCTTAAC
AGTAAGGGGCACTACTACAATGCTAACTACATGGATTACCCATCAATCGGGCATTTAGTG
AGAAAAATCACATCGCACAGTATTCAACCCATATTTGCCGTAACTTCGAATGTCATACAA
ACATACACAAATCTACAAAAAATGATCCCGAAATCGGTGGTTGGAGAATTATCTGGTGAT
TCATCAAACATTCAACTTATACAAGATGCATACAATGATACTGAAAGGATCAGGTGGGCA
CCGATTCACTGGGTACTTTTGGAGATTAAATCTCCAGCCGAGGTCTCTGTTTCATCACAA
ACGGCCCATTGTCTTGATGGATCGGTGCCGGGATTGCAATGTGATGGGGTGAAGTTGGGA
AATGTTGTCAATTTCACGTTCACCCTCTCCACGGAGAAATGCCTGACGTCGCCGGTGCAA
GTGATTGTGTCGCCGTACGGCTACAACGAGGTCGTCACTATTAACGTCGAGTCATTGTGT
GATTGTCAGTGCGAGGAGACAGAAGCGCCGACTAATAATTGCTCCGGCCACGGCAACTAC
CAGTGCGGATCCTGTGTCTGTGAGTCGGGTTTCACGGGTCTGGATTGCTCATGTGACCAG
AAGGATGTGCTGGGCATTGAATCCTACCTGGCTAACTGCACCGACCCCACGACGGGTGTC
GTGTGCAATAGGGGCGGCGAGTGTCAGTGCGGCTCGTGCATTTGCACACAATATGCAAAC
AAGAAAATTGATGGGAAATACTGTGAATGTGACAACACTTCATGTAAACGTGCTGGAGGA
AAAGTCTGTAATGGCATGGGCAAGTGCGATTGCGGCGATTGTATATGCGAGCCTGGGTGG
AAGGGCAAAGCGTGCGAATGTACGTTGGAACAAGCGTTATGCTACGACCACAGTGATGAT
GCGTTGGATTCGACCAAACCTTGTAATGGCAATGGGGAATGTGAATGTGGACAATGCGTT
TGCAAACTTAGTCAGGGTGGAGCTAAGTTCCGCGGTCAATATTGCGAAACGAAACCGCTG
GTTGTTTGCGACATTCATCGAGATTGCATCCAATGCGCATGGCACACTGGCAACTATAAT
GATACTGAGTGCAAGACGCAGTGTATGGGGTATAATGTGACTGTGGTAAGTGGGATGACA
GAAGATTATCAATACAGCGGGTACAGCCAGGAATGTCGATTCACTGATCTGTCTGACGAT
TGTACTTACCAAGCTAACTTTGAGGAAATTGATGGGATTATTATGGTAGAAGTGGAGCCT
GATAAAGTGTGCAAGACATACGCGAACCCAGTATACATCATCATCGGAATTATCGCTGCT
ATCGTGGGAATTGGGCTGGCCATCCTACTTATATGGAAGCTGCTAACCTCTATCAAGGAC
GCCAGGGAATATAAGAACTTCCAGAAAGAATCACAGAATCCTAAATGGCAGGGGGGCGAG
AATCCAATATTCAAGAAAGCAACCTCAACATTCAAAAACCCAATGTATTCGGCTGGGAAG
| PIRSF |
Integrin_bsu (IPR015812) - T[1-780] 6.7E-242 |
| PANTHER |
Integrin_bsu (IPR015812) - T[1-778] 4.2E-233 |
| Pfam |
Integrin_beta_N (IPR033760) - T[1-51] 1.4E-9 |
| PRINTS |
Integrin_bsu (IPR015812) - T[5-21] 1.1E-92 - T[88-101] 1.1E-92 - T[116-134] 1.1E-92 - T[156-175] 1.1E-92 - T[188-207] 1.1E-92 - T[221-243] 1.1E-92 - T[248-263] 1.1E-92 - T[292-315] 1.1E-92 - T[328-352] 1.1E-92 - T[588-601] 1.1E-92 - T[708-725] 1.1E-92 - T[725-743] 1.1E-92 - T[760-770] 1.1E-92 |
| SMART |
Integrin_bsu_VWA (IPR002369) - T[8-442] 1.3E-191 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[113-353] 3.11E-75 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[113-353] 4.5E-104 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[115-355] 1.4E-131 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[367-446] 3.09E-13 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[543-556] . - T[588-601] . |
| SMART |
Integrin_bsu_tail (IPR012896) - T[623-709] 2.9E-18 |
| SMART |
Integrin_bsu_cyt_dom (IPR014836) - T[733-779] 9.8E-23 |
| Pfam |
Integrin_bsu_cyt_dom (IPR014836) - T[733-776] 7.6E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB7_HUMAN | 37.738 % | 508 | 1.38E-169 |
| ITB6_HUMAN | 38.599 % | 507 | 2.25E-169 |
| ITB1_HUMAN | 40.903 % | 536 | 2.24E-180 |