- Transcript 'Cisavi.CG.ENS81.R215...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R215.380006-398932.05670.t
Possible name(s)
ITGB1; ITGB6; ITGB7
Gene model
Location
R215 [383,433 / 398,092]
Amino acid sequence
Length: 702
>Cisavi.CG.ENS81.R215.380006-398932.05670.p
ESAVGTATQIRPQIIKAQVRPGDPLNIELSFKQAEDYPVDLYYLLDLSKSMENDLNSLRA
LGRELGMSMQNITRDFRLGFGSFIDKTVMPYISTVPAKIKNPCSDKAPCVPTYSFHNDLP
LTPEIEAFVTSVNNVTHSSNLDNPEGGLDAMMQAIVCKESINWRKDATHLLVYSTDASFH
YAGDGKLGGIVLPNDGRCYLNSKGHYYNANYMDYPSIGHLVRKITSHSIQPIFAVTSNVI
QTYTNLQKMIPKSVVGELSGDSSNIQLIQDAYNDTERIRWAPIHWVTGVASEVSVSSQTA
HCLDGSVPGLQCDGVKLGNVVNFTFTLSTEKCLTSPVQVIVSPYGYNEVVTINVESLCDC
QCEETEAPTNNCSGHGNYQCGSCVCESGFTGLDCSCDQKDVLGIESYLANCTDPTTGVVC
NRGGECQCGSCICTQYANKKIDGKYCECDNTSCKRAGGKVCNGTWICMGKCDCGDCICEP
GWKGKACECTLEQALCYDHSDDALDSTKPCNGNGECECGQCVCKLSQGGAKFRGQYCETK
PLVVCDIHRDCIQCNWHTGNYNDTECKTQCMGLFISVNRKRLFISVNRKRLQECRFTDLS
DDCTYQANFEEIDGIIMVEVEPDKVCKTYANPVYIIIGIIAAIVGIGLAILLIWKLLTSI
KDAREYKNFQKESQNPKWQGGENPIFKKATSTFKNPMYSAGK
Nucleotide sequence
Length: 2,106
>Cisavi.CG.ENS81.R215.380006-398932.05670.t
GAATCAGCTGTTGGAACTGCCACGCAGATACGACCACAGATCATAAAAGCACAAGTCAGA
CCAGGTGATCCATTGAACATTGAGTTGTCATTCAAACAAGCTGAAGATTACCCAGTCGAT
CTATACTACCTCCTCGATCTCTCCAAATCCATGGAGAACGATCTCAACTCCCTTCGAGCC
CTCGGTCGCGAGCTTGGAATGAGCATGCAGAATATCACGAGGGATTTCCGACTTGGTTTC
GGGTCTTTTATTGATAAGACAGTAATGCCTTACATCTCCACTGTCCCTGCTAAGATAAAG
AACCCGTGCAGTGATAAAGCTCCTTGCGTCCCAACATACAGCTTCCATAATGATCTACCA
TTGACGCCTGAAATTGAAGCGTTTGTGACATCAGTCAACAACGTAACTCATTCATCCAAC
TTGGACAACCCTGAAGGCGGGCTCGACGCAATGATGCAAGCTATTGTGTGCAAGGAAAGC
ATCAACTGGCGCAAAGACGCAACTCATCTCCTGGTATATTCCACCGACGCGAGTTTCCAC
TACGCAGGAGATGGGAAGTTGGGAGGAATCGTTCTTCCTAATGATGGGAGGTGTTATCTT
AACAGTAAGGGGCACTACTACAATGCTAACTACATGGATTACCCATCAATCGGGCATTTA
GTGAGAAAAATCACATCGCACAGTATTCAACCCATATTTGCCGTAACTTCGAATGTCATA
CAAACATACACAAATCTACAAAAAATGATCCCGAAATCGGTGGTTGGAGAATTATCTGGT
GATTCATCAAACATCCAACTTATACAAGATGCATACAATGATACTGAAAGGATCAGGTGG
GCACCGATTCACTGGGTCACAGGGGTGGCATCCGAGGTCTCTGTTTCATCACAAACGGCC
CATTGTCTTGATGGATCGGTGCCGGGATTGCAATGTGATGGGGTGAAGTTGGGAAATGTT
GTCAATTTCACGTTCACCCTCTCCACGGAGAAATGCCTGACGTCGCCGGTGCAAGTGATT
GTGTCGCCGTACGGCTACAACGAGGTCGTCACTATTAACGTCGAGTCATTGTGTGATTGT
CAGTGCGAGGAGACAGAAGCGCCGACTAATAATTGCTCCGGCCACGGCAACTACCAGTGC
GGATCCTGTGTCTGTGAGTCGGGTTTCACGGGTCTGGATTGCTCATGTGACCAGAAGGAT
GTGCTGGGCATTGAATCCTACCTGGCTAACTGCACCGACCCCACGACGGGTGTCGTGTGC
AATAGGGGCGGCGAGTGTCAGTGCGGCTCGTGCATTTGCACACAATATGCAAACAAGAAA
ATTGATGGGAAATACTGTGAATGTGACAACACTTCATGTAAACGTGCTGGAGGAAAAGTC
TGTAATGGTACGTGGATATGCATGGGCAAGTGCGATTGCGGCGATTGTATATGCGAGCCT
GGGTGGAAGGGCAAAGCGTGCGAATGTACGTTGGAACAAGCGTTATGCTACGACCACAGT
GATGATGCGTTGGATTCGACCAAACCTTGTAATGGCAATGGGGAATGTGAATGTGGACAA
TGCGTTTGCAAACTTAGTCAGGGTGGAGCTAAGTTCCGCGGTCAATATTGCGAAACGAAA
CCGCTGGTTGTTTGCGACATTCATCGAGATTGCATCCAATGCAACTGGCACACTGGCAAC
TATAATGATACTGAGTGCAAGACGCAGTGTATGGGGCTGTTTATCTCCGTAAATAGGAAA
AGGCTGTTTATCTCCGTAAATAGGAAAAGGCTCCAGGAATGTCGATTCACTGATCTGTCT
GACGATTGTACTTACCAAGCTAACTTTGAGGAAATTGATGGGATTATTATGGTAGAAGTG
GAGCCTGATAAAGTGTGCAAGACATACGCGAACCCAGTATACATCATCATCGGAATTATC
GCTGCTATCGTGGGAATTGGGCTGGCCATCCTACTTATATGGAAGCTGCTAACCTCTATC
AAGGACGCCAGGGAATATAAGAACTTCCAGAAAGAATCACAGAATCCTAAATGGCAGGGG
GGCGAGAATCCAATATTCAAGAAAGCAACCTCAACATTCAAAAACCCAATGTATTCGGCT
GGGAAG
| SMART |
Integrin_bsu_VWA (IPR002369) - T[3-360] 3.2E-147 |
| PANTHER |
Integrin_bsu (IPR015812) - T[8-700] 2.2E-216 |
| PRINTS |
Integrin_bsu (IPR015812) - T[9-22] 1.2E-91 - T[37-55] 1.2E-91 - T[77-96] 1.2E-91 - T[109-128] 1.2E-91 - T[142-164] 1.2E-91 - T[169-184] 1.2E-91 - T[213-236] 1.2E-91 - T[249-273] 1.2E-91 - T[510-523] 1.2E-91 - T[630-647] 1.2E-91 - T[647-665] 1.2E-91 - T[682-692] 1.2E-91 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[34-274] 1.95E-75 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[34-274] 3.6E-104 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[36-276] 1.1E-131 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[297-364] 5.23E-13 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[510-523] . |
| SUPERFAMILY |
Integrin_bsu_tail_dom_sf (IPR036349) - T[544-626] 9.94E-5 |
| SMART |
Integrin_bsu_tail (IPR012896) - T[545-631] 4.1E-15 |
| Pfam |
Integrin_bsu_cyt_dom (IPR014836) - T[655-698] 6.7E-21 |
| SMART |
Integrin_bsu_cyt_dom (IPR014836) - T[655-701] 9.8E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB7_HUMAN | 36.857 % | 467 | 9.59E-155 |
| ITB6_HUMAN | 38.636 % | 467 | 9.33E-155 |
| ITB1_HUMAN | 42.135 % | 497 | 3.65E-166 |