Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 682

>Cisavi.CG.ENS81.R215.380006-398932.05671.p
ATQIRPQIIKAQVRPGDPLNIELSFKQAEDYPVDLYYLLDLSKSMENDLNSLRALGRELG
MSMQNITRDFRLGFGSFIDKTVMPYISTVPAKIKNPCSDKAPCVPTYSFHNDLPLTPEIE
AFVTSVNNVTHSSNLDNPEGGLDAMMQAIVCKESINWRKDATHLLVYSTDASFHYAGDGK
LGGIVLPNDGRCYLNSKGHYYNANYMDYPSIGHLVRKITSHSIQPIFAVTSNVIQTYTDQ
VGTDSLGHRGNPLTKHIQSFSYLPKKTYISSNICAQWSIQPQVLLEIKSPAEVSVSSQTA
HCLDGSVNFTFTLSTEKCLTSPVQVIVSPYGYNEVVTINVESLCDCQCEETEAPTNNCSG
HGNYQCGSCVCESGFTGLDCSCDQKDVLGIESYLANCTDPTTGVVCNRGGECQCGSCICT
QYANKKIDGKYCECDNTSCKRAGGKVCNGTWICMGKCDCGDCICEPGWKGKACECTLEQA
LCYDHSDDALDSTKPCNGNGECECGQCVCKLSQGGAKFRGQYCETKPLVVCDIHRDCIQC
NGHTGNYNDTECKTQCMGYNVTVVKDYQYSGYSQECRFTDLSDDCTYQANFEEIDGIIMV
EVEPDKVCKTYANPVYIIIGIIAAIVGIGLAILLIWKLLTSIKDAREYKNFQKESQNPKW
QGGENPIFKKATSTFKNPMYSA

Nucleotide sequence

Length: 2,046

>Cisavi.CG.ENS81.R215.380006-398932.05671.t
GCCACGCAGATACGACCACAGATCATAAAAGCACAAGTCAGACCAGGTGATCCATTGAAC
ATTGAGTTGTCATTCAAACAAGCTGAAGATTACCCAGTCGATCTATACTACCTCCTCGAT
CTCTCCAAATCCATGGAGAACGATCTCAACTCCCTTCGAGCCCTCGGTCGCGAGCTTGGA
ATGAGCATGCAGAATATCACGAGGGATTTCCGACTTGGTTTCGGGTCTTTTATTGATAAG
ACAGTAATGCCTTACATCTCCACTGTCCCTGCTAAGATAAAGAACCCGTGCAGTGATAAA
GCTCCTTGCGTCCCAACATACAGCTTCCATAATGATCTACCATTGACGCCTGAAATTGAA
GCGTTTGTGACATCAGTCAACAACGTAACTCATTCATCCAACTTGGACAACCCTGAAGGC
GGGCTCGACGCAATGATGCAAGCTATTGTGTGCAAGGAAAGCATCAACTGGCGCAAAGAC
GCAACTCATCTCCTGGTATATTCCACCGACGCGAGTTTCCACTACGCAGGAGATGGGAAG
TTGGGAGGAATCGTTCTTCCTAATGATGGGAGGTGTTATCTTAACAGTAAGGGGCACTAC
TACAATGCTAACTACATGGATTACCCATCAATCGGGCATTTAGTGAGAAAAATCACATCG
CACAGTATTCAACCCATATTTGCCGTAACTTCGAATGTCATACAAACATACACAGATCAG
GTGGGCACCGATTCACTGGGTCACAGGGGTAATCCACTAACTAAACACATACAGTCATTT
TCATATCTCCCCAAAAAAACTTACATTTCTTCCAATATTTGTGCTCAATGGTCGATTCAA
CCCCAGGTACTTTTGGAGATTAAATCTCCAGCCGAGGTCTCTGTTTCATCACAAACGGCC
CATTGTCTTGATGGATCGGTCAATTTCACGTTCACCCTCTCCACGGAGAAATGCCTGACG
TCGCCGGTGCAAGTGATTGTGTCGCCGTACGGCTACAACGAGGTCGTCACTATTAACGTC
GAGTCATTGTGTGATTGTCAGTGCGAGGAGACAGAAGCGCCGACTAATAATTGCTCCGGC
CACGGCAACTACCAGTGCGGATCCTGTGTCTGTGAGTCGGGTTTCACGGGTCTGGATTGC
TCATGTGACCAGAAGGATGTGCTGGGCATTGAATCCTACCTGGCTAACTGCACCGACCCC
ACGACGGGTGTCGTGTGCAATAGGGGCGGCGAGTGTCAGTGCGGCTCGTGCATTTGCACA
CAATATGCAAACAAGAAAATTGATGGGAAATACTGTGAATGTGACAACACTTCATGTAAA
CGTGCTGGAGGAAAAGTCTGTAATGGTACGTGGATATGCATGGGCAAGTGCGATTGCGGC
GATTGTATATGCGAGCCTGGGTGGAAGGGCAAAGCGTGCGAATGTACGTTGGAACAAGCG
TTATGCTACGACCACAGTGATGATGCGTTGGATTCGACCAAACCTTGTAATGGCAATGGG
GAATGTGAATGTGGACAATGCGTTTGCAAACTTAGTCAGGGTGGAGCTAAGTTCCGCGGT
CAATATTGCGAAACGAAACCGCTGGTTGTTTGCGACATTCATCGAGATTGCATCCAATGC
AACGGCCACACTGGCAACTATAATGATACTGAGTGCAAGACGCAGTGTATGGGGTATAAT
GTGACTGTGGTAAAAGATTATCAATACAGCGGGTACAGCCAGGAATGTCGATTCACTGAT
CTGTCTGACGATTGTACTTACCAAGCTAACTTTGAGGAAATTGATGGGATTATTATGGTA
GAAGTGGAGCCTGATAAAGTGTGCAAGACATACGCGAACCCAGTATACATCATCATCGGA
ATTATCGCTGCTATCGTGGGAATTGGGCTGGCCATCCTACTTATATGGAAGCTGCTAACC
TCTATCAAGGACGCCAGGGAATATAAGAACTTCCAGAAAGAATCACAGAATCCTAAATGG
CAGGGGGGCGAGAATCCAATATTCAAGAAAGCAACCTCAACATTCAAAAACCCAATGTAT
TCGGCT

InterProScan

SMART	Integrin_bsu_VWA (IPR002369) - T[1-346] 4.4E-108
PANTHER	Integrin_bsu (IPR015812) - T[2-681] 1.7E-198
PRINTS	Integrin_bsu (IPR015812) - T[3-16] 1.0E-85 - T[31-49] 1.0E-85 - T[71-90] 1.0E-85 - T[103-122] 1.0E-85 - T[136-158] 1.0E-85 - T[163-178] 1.0E-85 - T[207-230] 1.0E-85 - T[496-509] 1.0E-85 - T[612-629] 1.0E-85 - T[629-647] 1.0E-85 - T[664-674] 1.0E-85
SUPERFAMILY	vWFA_dom_sf (IPR036465) - T[28-241] 4.2E-68
Pfam	Integrin_bsu_VWA (IPR002369) - T[28-239] 1.6E-94
Gene3D	vWFA_dom_sf (IPR036465) - T[30-270] 2.6E-116
SUPERFAMILY	Integrin_dom_sf (IPR032695) - T[297-350] 7.85E-8
ProSitePatterns	Integrin_bsu (IPR015812) - T[496-509] .
SUPERFAMILY	Integrin_bsu_tail_dom_sf (IPR036349) - T[530-608] 1.57E-5
SMART	Integrin_bsu_tail (IPR012896) - T[531-613] 1.0E-17
Pfam	Integrin_bsu_cyt_dom (IPR014836) - T[637-680] 6.5E-21
SMART	Integrin_bsu_cyt_dom (IPR014836) - T[637-682] 2.4E-21