- Transcript 'Cisavi.CG.ENS81.R215...' >
- Transcript 'Cisavi.CG.ENS81.R215...' >
- Transcript 'Cisavi.CG.ENS81.R215...' >
- Transcript 'Cisavi.CG.ENS81.R215...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R215.380006-398932.05672.t
Possible name(s)
ITGB1; ITGB6; ITGB7
Gene model
Location
R215 [384,114 / 398,092]
Amino acid sequence
Length: 715
>Cisavi.CG.ENS81.R215.380006-398932.05672.p
GDPLNIELSFKQAEDYPVDLYYLLDLSKSMENDLNSLRALGRELGMSMQNITRDFRLGFG
SFIDKTVMPYISTVPAKIKNPCSDKAPCVPTYSFHNDLPLTPEIEAFVTSVNNVTHSSNL
DNPEGGLDAMMQAIVCKVRLVLKNFALSPCFVQAPVYRFNINWRKDATHLLVYSTDASFH
YAGDGKLGGIVLPNDGRCYLNSKGHYYNANYMVGFCYIFIAMILLHFVLIFAGLPINRAF
SEKNHIAQYSTHICRNFECHTNIHSKYLVDLGFLQNLQKMIPKSVVGELSGDSSNIQLIQ
DAYNDTERIRWAPIHWVTGVACHPCYDVGTDSLGHRGGICLIQPFHSQVNFTFTLSTEKC
LTSPVQVIVSPYGYNEVVTINVESLCDCQCEETEAPTNNCSGHGNYQCGSCVCESGFTGL
DCSCDQKDVLGIESYLANCTDPTTGVVCNRGGECQCGSCICTQYANKKIDGKYCECDNTS
CKRAGGKVCNGMGKCDCGDCICEPGWKGKACECTLEQALCYDHSDDALDSTKPCNGNGEC
ECGQCVCKLSQGGAKFRGQYCETKPLVVCDIHRDCIQCNGMAHWQLILSARRSMTEDYQY
SGYSQECRFTDLSDDCTYQANFEEIDGIIMVEVEPDKVCKTYANPVYIIIGIIAAIVGIG
LAILLIWKLLTSIKDAREYKNFQKESQNPKWQGGENPIFKKATSTFKNPMYSAGK
Nucleotide sequence
Length: 2,145
>Cisavi.CG.ENS81.R215.380006-398932.05672.t
GGTGATCCATTGAACATTGAGTTGTCATTCAAACAAGCTGAAGATTACCCAGTCGATCTA
TACTACCTCCTCGATCTCTCCAAATCCATGGAGAACGATCTCAACTCCCTTCGAGCCCTC
GGTCGCGAGCTTGGAATGAGCATGCAGAATATCACGAGGGATTTCCGACTTGGTTTCGGG
TCTTTTATTGATAAGACAGTAATGCCTTACATCTCCACTGTCCCTGCTAAGATAAAGAAC
CCGTGCAGTGATAAAGCTCCTTGCGTCCCAACATACAGCTTCCATAATGATCTACCATTG
ACGCCTGAAATTGAAGCGTTTGTGACATCAGTCAACAACGTAACTCATTCATCCAACTTG
GACAACCCTGAAGGCGGGCTCGACGCAATGATGCAAGCTATTGTGTGCAAGGTAAGGCTT
GTCTTAAAAAATTTTGCATTGTCTCCATGTTTTGTACAAGCACCGGTATACAGATTTAAC
ATCAACTGGCGCAAAGACGCAACTCATCTCCTGGTATATTCCACCGACGCGAGTTTCCAC
TACGCAGGAGATGGGAAGTTGGGAGGAATCGTTCTTCCTAATGATGGGAGGTGTTATCTT
AACAGTAAGGGGCACTACTACAATGCTAACTACATGGTAGGGTTTTGTTATATATTTATC
GCGATGATTTTGCTACATTTTGTTCTCATCTTCGCAGGATTACCCATCAATCGGGCATTT
AGTGAGAAAAATCACATCGCACAGTATTCAACCCATATTTGCCGTAACTTCGAATGTCAT
ACAAACATACACAGTAAGTATTTGGTTGATTTGGGATTTCTACAGAATCTACAAAAAATG
ATCCCGAAATCGGTGGTTGGAGAATTATCTGGTGATTCATCAAACATTCAACTTATACAA
GATGCATACAATGATACTGAAAGGATCAGGTGGGCACCGATTCACTGGGTCACAGGGGTG
GCATGTCACCCCTGTTATGATGTAGGCACCGATTCACTGGGTCACAGGGGTGGCATTTGC
TTGATTCAACCATTTCATTCCCAGGTCAATTTCACGTTCACCCTCTCCACGGAGAAATGC
CTGACGTCGCCGGTGCAAGTGATTGTGTCGCCGTACGGCTACAACGAGGTCGTCACTATT
AACGTCGAGTCATTGTGTGATTGTCAGTGCGAGGAGACAGAAGCGCCGACTAATAATTGC
TCCGGCCACGGCAACTACCAGTGCGGATCCTGTGTCTGTGAGTCGGGTTTCACGGGTCTG
GATTGCTCATGTGACCAGAAGGATGTGCTGGGCATTGAATCCTACCTGGCTAACTGCACC
GACCCCACGACGGGTGTCGTGTGCAATAGGGGCGGCGAGTGTCAGTGCGGCTCGTGCATT
TGCACACAATATGCAAACAAGAAAATTGATGGGAAATACTGTGAATGTGACAACACTTCA
TGTAAACGTGCTGGAGGAAAAGTCTGTAATGGCATGGGCAAGTGCGATTGCGGCGATTGT
ATATGCGAGCCTGGGTGGAAGGGCAAAGCGTGCGAATGTACGTTGGAACAAGCGTTATGC
TACGACCACAGTGATGATGCGTTGGATTCGACCAAACCTTGTAATGGCAATGGGGAATGT
GAATGTGGACAATGCGTTTGCAAACTTAGTCAGGGTGGAGCTAAGTTCCGCGGTCAATAT
TGCGAAACGAAACCGCTGGTTGTTTGCGACATTCATCGAGATTGCATCCAATGCAACGGC
ATGGCACACTGGCAACTAATACTGAGTGCAAGACGCAGTATGACAGAAGATTATCAATAC
AGCGGGTACAGCCAGGAATGTCGATTCACTGATCTGTCTGACGATTGTACTTACCAAGCT
AACTTTGAGGAAATTGATGGGATTATTATGGTAGAAGTGGAGCCTGATAAAGTGTGCAAG
ACATACGCGAACCCAGTATACATCATCATCGGAATTATCGCTGCTATCGTGGGAATTGGG
CTGGCCATCCTACTTATATGGAAGCTGCTAACCTCTATCAAGGACGCCAGGGAATATAAG
AACTTCCAGAAAGAATCACAGAATCCTAAATGGCAGGGGGGCGAGAATCCAATATTCAAG
AAAGCAACCTCAACATTCAAAAACCCAATGTATTCGGCTGGGAAG
| SMART |
Integrin_bsu_VWA (IPR002369) - T[1-388] 9.3E-58 |
| PIRSF |
Integrin_bsu (IPR015812) - T[1-144] 8.4E-65 - T[149-217] 1.4E-20 - T[269-715] 7.3E-97 |
| PANTHER |
Integrin_bsu (IPR015812) - T[1-713] 7.1E-175 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[13-211] 9.2E-76 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[13-136] 1.9E-81 - T[158-212] 1.9E-81 - T[274-306] 6.0E-13 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[13-212] 6.04E-53 - T[242-305] 6.04E-53 |
| PRINTS |
Integrin_bsu (IPR015812) - T[16-34] 6.8E-55 - T[56-75] 6.8E-55 - T[88-107] 6.8E-55 - T[121-143] 6.8E-55 - T[489-502] 6.8E-55 - T[643-660] 6.8E-55 - T[660-678] 6.8E-55 - T[695-705] 6.8E-55 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[336-392] 4.66E-8 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[489-502] . - T[534-547] . |
| SMART |
Integrin_bsu_tail (IPR012896) - T[569-644] 2.1E-8 |
| Pfam |
Integrin_bsu_cyt_dom (IPR014836) - T[668-711] 6.8E-21 |
| SMART |
Integrin_bsu_cyt_dom (IPR014836) - T[668-714] 9.8E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB7_HUMAN | 32.972 % | 377 | 6.04E-120 |
| ITB6_HUMAN | 34.918 % | 387 | 5.75E-124 |
| ITB1_HUMAN | 36.849 % | 409 | 3.55E-132 |