- Transcript 'Moocci.CG.ELv1_2.S11...' >
- Transcript 'KH2012:KH.C1.274.v1....' >
- Molecular Tool 'Beta-catenin MO (Wada 2008)' >
- Transcript 'Cisavi.CG.ENS81.R21....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R21.629188-631061.07173.t
Possible name(s)
CCT3; CCT4; CCT7
Gene model
Location
R21 [629,187 / 631,061]
Amino acid sequence
Length: 546
>Cisavi.CG.ENS81.R21.629188-631061.07173.p
PRQGTAIATPTRPSSIHNMSAPVLVLNQNSKRESGRKVQLGNVEAAKTIADVIRTCLGPR
SMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKTMIEISRTQDEEVGDGTTSVIILAGE
MMVAAQQFLEQKMHPTVIIAAYRKALDDMQEILNELSVDVDLTKKTEMRKIVKSAIGTKF
INKWADLACDMAIKSVSTVVLENQGTGRREIDIKRYAKVEKVPGGILEDSEVLDGVMLNK
DITHPAMRRKIENPRILLLDCSLEYQKGESQTDMELSQETDFEKILQMEENFIKQVTSEI
IAFKPDLIFTEKGISDLAQYFLNKANITAIRRVRKSDNNRIARACGATVCSRTEEIREED
IGTGAGLFEVRKFGEEYFTFITKCKEPKACTILLRGASKDILMEVERNLQDAMQVTRNVM
INPQLLPGGGAVEMAVAQRMKERSKSMTGVEQWPYRAVADALEVIPRTLIQNCGASTIRT
ITALRAKHATDGNESWGVNGETGKIVDMKELDVWEPLSVKLQTYKTAMETAMLLLRIDDI
VSGSKK
Nucleotide sequence
Length: 1,638
>Cisavi.CG.ENS81.R21.629188-631061.07173.t
CCCAGACAAGGCACTGCAATAGCAACACCAACTCGACCTAGCTCCATACACAATATGTCT
GCTCCTGTTTTAGTTCTCAATCAAAATTCGAAGCGCGAATCCGGCCGCAAAGTCCAACTC
GGAAATGTTGAAGCAGCGAAGACGATCGCAGACGTAATCCGGACATGTTTGGGCCCGAGA
TCGATGTTGAAAATGCTCATGGACCCGATGGGGGGGATCGTGATGACGAACGACGGGAAC
GCGATCCTACGCGAGATCACAGTCCAACATCCGGCTGCAAAAACTATGATCGAGATCAGC
CGGACACAAGATGAGGAGGTGGGAGACGGAACGACGTCGGTTATCATCCTCGCTGGGGAG
ATGATGGTGGCAGCGCAGCAGTTCCTGGAGCAGAAGATGCATCCGACCGTGATCATCGCC
GCGTATCGCAAAGCACTCGATGACATGCAGGAGATACTGAATGAACTAAGTGTCGACGTG
GACCTCACAAAGAAGACTGAGATGCGAAAGATCGTTAAAAGCGCCATCGGGACCAAGTTT
ATCAATAAATGGGCGGATTTAGCATGCGATATGGCTATCAAGTCCGTGTCGACTGTTGTT
CTTGAAAACCAGGGCACCGGTCGTAGGGAAATTGATATCAAGCGATATGCGAAGGTTGAA
AAGGTTCCCGGAGGTATTTTGGAAGATTCGGAGGTCCTGGATGGCGTGATGTTGAACAAG
GATATAACACATCCAGCTATGAGGAGGAAGATTGAAAACCCAAGGATCTTGCTCCTTGAC
TGCTCTCTCGAATATCAGAAAGGCGAAAGCCAGACGGATATGGAGCTAAGTCAAGAAACG
GACTTTGAGAAAATTCTGCAAATGGAGGAGAACTTCATCAAACAGGTCACGAGCGAAATT
ATCGCTTTTAAACCTGATTTAATATTCACTGAAAAAGGAATTTCGGACTTGGCGCAATAT
TTCTTGAACAAAGCGAATATAACTGCAATTCGGAGAGTGAGGAAATCCGATAACAATCGA
ATTGCTCGTGCATGCGGTGCCACTGTGTGCTCAAGAACAGAGGAGATAAGAGAGGAGGAC
ATCGGCACAGGAGCCGGACTTTTCGAGGTTCGAAAATTCGGTGAGGAGTATTTTACGTTC
ATCACAAAATGCAAGGAGCCGAAAGCGTGCACCATTCTTCTTCGTGGAGCGAGCAAGGAC
ATTCTAATGGAGGTTGAGAGGAATCTGCAAGATGCGATGCAAGTTACAAGGAATGTGATG
ATCAACCCGCAACTTCTACCAGGTGGTGGCGCTGTTGAGATGGCTGTCGCGCAACGGATG
AAGGAGAGATCAAAATCGATGACCGGAGTCGAACAGTGGCCGTATAGAGCGGTTGCTGAT
GCTTTGGAGGTCATCCCACGCACGCTGATACAGAATTGTGGAGCTAGCACCATCCGAACC
ATCACTGCGCTTCGAGCAAAGCACGCTACGGACGGAAACGAATCGTGGGGAGTAAACGGA
GAAACAGGGAAGATCGTGGACATGAAAGAACTCGACGTCTGGGAGCCGTTGTCGGTGAAA
CTTCAAACTTACAAGACAGCGATGGAGACGGCAATGTTGCTGCTTAGAATCGACGATATT
GTGTCGGGATCGAAGAAG
| CDD |
Chap_CCT_gamma (IPR012719) - T[22-543] 0.0 |
| TIGRFAM |
Chap_CCT_gamma (IPR012719) - T[22-546] 4.2E-277 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[24-546] 1.1E-285 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[30-160] 3.92E-86 - T[423-543] 3.92E-86 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[42-159] 3.4E-181 - T[423-540] 3.4E-181 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[49-542] 7.1E-165 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[51-67] 4.5E-27 - T[73-91] 4.5E-27 - T[103-122] 4.5E-27 - T[391-413] 4.5E-27 - T[425-437] 4.5E-27 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[54-66] . - T[75-91] . - T[103-111] . |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[160-233] 1.83E-24 - T[387-422] 1.83E-24 |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[160-233] 3.4E-181 - T[387-422] 3.4E-181 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[229-396] 5.76E-53 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[234-386] 3.4E-181 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPH_HUMAN | 31.707 % | 289 | 3.21E-91 |
| TCPG_HUMAN | 72.952 % | 817 | 0 |
| TCPD_HUMAN | 32.882 % | 298 | 1.32E-94 |