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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Haaura.CG.MTP2014.S1...'
  4. Transcript 'Cisavi.CG.ENS81.R220...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R220.305517-309744.09523.t

Possible name(s)

LRGUK; LRRC23; PPP1R7

Location

R220 [305,516 / 309,744]

Sequences

Amino acid sequence

Length: 319

>Cisavi.CG.ENS81.R220.305517-309744.09523.p
MSEGSDFEEDAGEEEETPTETGKLPENPLVQQMIPECLNLLCKIGNGLAHAYVRLDAHER
DLTDVELLKKFIHVRYVDLSGNLLEDISSLNHLTHLLTLKADKNNLKSAKLDSLPYLQIM
NLSGNQITSTEGVEHPLLEQLNLNSNHITAVSGLNPKHLTNLTTLELRGNKLTTTAGIYL
PNLRNLYLAGNGLKQVEDLDKLENLMILHLRDNQIDKLDGFSENMKKLQYINLRANNITD
LKEAKKLVALPMLRALVLNDNPCLEEDGYRMEVLIILRKLERLDKDEYTDEERVEAEDLY
EQRRQDAMVAADDEVNDDD

Nucleotide sequence

Length: 977

>Cisavi.CG.ENS81.R220.305517-309744.09523.t
ATGTCGGAAGGATCAGATTTTGAAGAAGATGCTGGAGAAGAGGAGGAGACACCGACTGAG
ACCGGAAAACTTCCGGAAAACCCCCTTGTACAACAAATGATCCCTGAGTGCCTTAACCTG
CTCTGCAAGATTGGAAATGGGCTGGCACATGCTTATGTTCGATTAGATGCTCATGAAAGA
GACCTAACTGATGTTGAATTGTTAAAGAAGTTCATTCATGTTCGCTATGTGGACCTTTCC
GGTAACCTCCTTGAAGATATATCCTCTCTGAACCACCTTACTCACCTCCTCACGCTGAAA
GCCGACAAGAATAACTTAAAATCCGCCAAACTTGACTCGTTACCATACTTACAGATTATG
AATTTGTCGGGAAACCAAATCACAAGTACTGAAGGTGTGGAACACCCGTTGCTGGAACAA
CTCAATTTAAACAGTAACCACATCACAGCAGTGAGTGGTTTGAATCCCAAGCATCTGACC
AACCTAACAACCCTCGAACTGCGCGGCAACAAACTTACCACCACCGCTGGGATCTATCTT
CCAAACCTCAGGAATTTGTACCTGGCAGGCAATGGTTTGAAACAAGTAGAAGATTTGGAC
AAATTGGAAAATTTAATGATACTTCATTTGCGCGATAATCAGATTGACAAGCTGGATGGA
TTCAGTGAAAATATGAAGAAATTACAATATATTAATTTGAGGGCAAACAACATCACTGAT
TTGAAAGAAGCAAAGAAGTTGGTAGCACTTCCCATGCTGAGAGCACTTGTCTTAAACGAC
AACCCATGTCTGGAGGAGGATGGATACCGGATGGAGGTCCTCATCATCCTCCGGAAGCTA
GAGAGGCTGGATAAGGATGAATATACTGATGAAGAGAGAGTGGAGGCAGAGGACCTCTAT
GAGCAGCGGAGGCAAGATGCGATGGTCGCTGCAGATGATGAAGTCAATGACGACGACGCA
TGATGTTCGATATTTAT

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[39-176] 1.1E-21 - T[177-299] 1.7E-26
ProSiteProfiles
Leu-rich_rpt (IPR001611) - T[73-94] 7.866 - T[95-115] 4.878 - T[116-136] 6.495 - T[137-158] 6.996 - T[161-181] 5.856 - T[182-203] 8.536 - T[204-225] 7.273 - T[227-248] 7.304

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PP1R7_HUMAN 29.167 % 85.9 5.53E-19
LRGUK_HUMAN 33.103 % 119 8.18E-30
LRC23_HUMAN 60.073 % 308 2.46E-104