- Transcript 'Haaura.CG.MTP2014.S6...' >
- Transcript 'Cisavi.CG.ENS81.R22....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R22.812237-819985.09025.t
Possible name(s)
AGO1; AGO2; AGO3
Gene model
Location
R22 [812,975 / 819,700]
Amino acid sequence
Length: 740
>Cisavi.CG.ENS81.R22.812237-819985.09025.p
FQAPPRPNQGQVGKPIWLKANYFKVSIPNGDIHHYDIDIKPDKCPRRVNREIINTMVENF
RSAIFQDRKPVFDGRKNLYTAQPLPIDKQKLEVEVTLPGEGRDRTFTVAIKWASRVSLYS
LKLALEGKMHGIPFETVQALDVVMRHLPSLRYTPVGRSFFSAPEGYTPPLGGGREVWFGF
HQSMRPSQWKMMLNIDVSATAFYRAQSCVQFLCDVLELRIEDLRLIRSLTDSQRVKFTKE
IRGLKVEITHCGTMRRKYRVCNVTRRAASTQTFPLQLESGQTIECSVTRYFQEKHSKTLQ
FPFLPCLQVGQEQKHTYLPIEVCNIVQGQRCIKKLTDSQTSTMIKATARSAPDREKEIAQ
LTRMQATPNQGVWDMRGKQFHSGISIDVWAIACFAHQRMCSVILFISAEVKRVGDTLLGI
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGVNNILVPSLRPKVFNDPVIFFGADVTHPP
AGDTRKPSIAAVVGSMDAHPSRYSATVRVQQHREEIIRDLAVMVRDLMVEFYKATHYKPV
RVIMYRDGVSEGQFQQVLSTELRAIREACTMLEVGYQPGITFIVVQKRHHTRLFCRNHED
RSGKSGNIPAGTTVDTGICHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNNFMADELQVL
TYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKDHDSGEGSLQSGHTQNDQDAQL
QAMSKAVVVHENTVRNMYFA
Nucleotide sequence
Length: 2,490
>Cisavi.CG.ENS81.R22.812237-819985.09025.t
TTCCAAGCTCCACCCAGACCTAACCAAGGTCAGGTGGGCAAACCGATTTGGCTTAAAGCG
AATTACTTTAAAGTTTCCATCCCAAATGGAGACATCCACCATTACGATATTGATATCAAA
CCTGATAAATGTCCGAGAAGGGTCAACAGGGAGATTATCAACACAATGGTTGAAAATTTT
CGATCAGCTATATTCCAAGACCGCAAACCTGTATTCGACGGACGAAAGAATCTTTACACA
GCCCAACCACTTCCCATTGATAAGCAAAAGTTGGAGGTTGAGGTTACGCTCCCTGGCGAA
GGCAGGGACCGCACATTCACTGTCGCCATCAAATGGGCATCGCGTGTCTCGTTATATTCC
CTTAAACTCGCCCTGGAAGGCAAAATGCATGGAATTCCCTTTGAAACAGTTCAAGCACTG
GATGTGGTGATGAGACATCTCCCATCACTTAGGTATACTCCTGTCGGACGATCTTTCTTC
TCAGCTCCAGAAGGTTACACTCCACCACTGGGAGGAGGTAGGGAGGTGTGGTTTGGTTTC
CACCAATCCATGAGGCCCTCCCAATGGAAAATGATGCTGAATATCGATGTATCGGCGACT
GCGTTTTACCGTGCTCAGTCATGCGTGCAGTTCCTTTGTGACGTGTTGGAACTGAGAATC
GAAGATTTGCGGCTCATTCGTAGTCTCACTGATTCCCAGCGGGTCAAGTTCACCAAAGAA
ATACGTGGACTGAAGGTTGAGATCACTCACTGTGGTACGATGCGACGCAAATACCGGGTG
TGCAATGTTACCAGGCGAGCTGCTTCGACACAAACCTTTCCTTTGCAACTGGAGTCGGGC
CAGACGATCGAATGCTCGGTGACCAGATACTTTCAAGAAAAACATTCGAAAACACTTCAA
TTCCCTTTCCTACCATGCTTGCAAGTAGGACAGGAACAGAAGCACACTTACCTCCCGATA
GAAGTGTGCAACATCGTGCAAGGACAGCGCTGCATCAAGAAGCTCACTGACAGCCAGACG
TCGACCATGATTAAGGCGACAGCTCGCTCAGCTCCCGACCGTGAGAAGGAAATTGCTCAA
CTTACACGCATGCAAGCCACGCCCAACCAAGGAGTGTGGGACATGCGAGGAAAGCAGTTT
CACTCCGGCATCAGTATTGATGTGTGGGCCATCGCGTGCTTTGCTCATCAGCGAATGTGT
TCGGTGATCCTTTTTATTTCAGCTGAGGTAAAGAGAGTTGGCGACACATTGCTCGGTATC
GCCACCCAGTGCGTGCAAGTAAAGAACGTCGTGAAAACGTCTCCGCAGACTTTGTCCAAC
CTCTGTCTCAAGATCAATGTTAAACTCGGAGGAGTGAACAACATTCTTGTGCCTTCGCTT
CGACCAAAGGTGTTCAACGACCCCGTGATATTCTTCGGAGCTGACGTGACCCACCCACCT
GCAGGTGACACCCGCAAGCCTTCCATAGCTGCGGTGGTTGGGAGCATGGACGCTCATCCG
TCCCGGTATAGCGCCACCGTGCGGGTGCAACAGCATCGGGAAGAGATCATCCGCGATCTC
GCTGTGATGGTGCGCGACCTGATGGTGGAGTTCTACAAGGCGACACACTACAAACCCGTG
CGCGTCATCATGTACAGGGATGGCGTGTCAGAGGGCCAGTTTCAACAGGTTCTCTCCACC
GAGCTACGAGCGATACGTGAGGCGTGCACCATGCTCGAGGTCGGGTACCAACCCGGCATC
ACGTTCATCGTGGTACAGAAGCGTCACCACACGAGGTTGTTCTGTCGCAACCACGAGGAC
CGAAGTGGGAAGAGTGGAAACATCCCGGCCGGTACCACCGTTGATACCGGCATCTGTCAT
CCGACCGAGTTCGATTTCTATCTATGCAGCCACGCTGGAATTCAGGGCACGTCGCGGCCT
TCCCATTACCACGTGTTGTGGGACGACAACAACTTCATGGCGGACGAGCTTCAGGTTCTC
ACCTACCAGCTCTGCCACACCTACGTCCGCTGCACACGCTCCGTCTCCATCCCTGCTCCA
GCATATTATGCGCATCTAGTGGCGTTCCGTGCACGCTACCACTTGGTGGACAAGGACCAT
GACAGTGGCGAAGGCTCCCTGCAGAGTGGCCACACCCAGAACGATCAAGACGCCCAGCTC
CAAGCCATGTCCAAGGCGGTTGTCGTCCACGAGAACACAGTTCGCAACATGTACTTCGCT
TAACCCTGTGATTTAGGAGAATTTCCTTTTCGAATCTTTTAGTCGATTTTACCCCTCCCC
CACCACTTGTAGAATAATATGAACAATGCACACGATAGCGATCAATTTGCCAAGTCCAAT
CACTCTTGTCACCCACAGTATATGTACATATTGTACATAGTGGACATTTGTACAGTTCGA
CCCAAGATGAAATAGTTTACTTCACTAGTAAGAGTTGAAGTTAGATCAATTTATATCCAA
CCGTATTTATTACTCTCTTCCATTACCGCG
| Pfam |
Argonaute_N (IPR032474) - T[14-144] 7.7E-32 |
| SUPERFAMILY |
PAZ_dom_sf (IPR036085) - T[16-362] 2.67E-61 |
| SMART |
ArgoL1 (IPR014811) - T[153-205] 1.0E-26 |
| Pfam |
ArgoL1 (IPR014811) - T[154-204] 1.0E-22 |
| ProSiteProfiles |
PAZ_dom (IPR003100) - T[210-327] 26.29 |
| SMART |
PAZ_dom (IPR003100) - T[213-349] 0.0027 |
| Pfam |
PAZ_dom (IPR003100) - T[227-344] 1.2E-23 |
| Pfam |
Argonaute_Mid_dom (IPR032473) - T[367-401] 9.0E-13 |
| SMART |
Piwi (IPR003165) - T[401-696] 1.2E-119 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[408-697] 1.37E-84 |
| Pfam |
Piwi (IPR003165) - T[409-695] 1.2E-107 |
| ProSiteProfiles |
Piwi (IPR003165) - T[410-696] 49.594 |
| Gene3D |
RNaseH_sf (IPR036397) - T[460-740] 3.8E-131 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AGO2_HUMAN | 64.27 % | 597 | 0 |
| AGO1_HUMAN | 63.039 % | 581 | 0 |
| AGO4_HUMAN | 61.782 % | 1042 | 0 |