- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R2.2...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R2.2928354-2956118.16455.t
Possible name(s)
GLI1; GLI2; GLI3
Gene model
Location
R2 [2,928,353 / 2,956,118]
Amino acid sequence
Length: 1,552
>Cisavi.CG.ENS81.R2.2928354-2956118.16455.p
METAGKNDIDVLHQKCGKDFSREEKATPQTHLPPDHKIEGSEHHSRRSEAPKPGKQSAFF
SSQDENEAREEAVVSSSTSPSDKRTKRSSSPDHNEHLRQQNDELRHQSRHQSVREAATST
TTFEDEFEKQFHGNENLGVTSSDGRPPSCGTPLGKIKEETSSNNRKVMLLGNAHQFTKPS
PSNRNMTSSQAGNTNCNGEDRRYPIGNPHTQVDPHSRDGRYPFEPRTMNNAPGFSGSPIH
SDISLIPMSPQQSANPFNYNSSLEFYMGGLSQGGLRSPTMSILSQARNLSPHHSIQELEK
LCYPYYNAHQSNMSVNGAQQNSNQSLPGNFSQNINPLAYYQLMQQQQRLLAVAARNDRNL
ALSLEKQEDFGRFPSPLCRSRARKRPLSISPCFSDTGLDITAMIRTSPNSLLPFGGLTNS
RSSSVASGGSYGHLAAGGISPTFGYQTPMMTSPQHLHAHLLSRQMQSSFAGQLMPGFPTN
QGAFDKPNSRFDPNISTRNYLPHVGASAASNDMCNPHRDNKNFSKHSVDPQSPNVQFNNN
NNNSNSIPGISPGGHGANEENDVVYDTNCSWVNCSLEFDTQEQLVHHINNDHIHGDKKEF
VCRWIGCARDQRPFKAQYMLVVHMRRHTGEKPHRCTFEGCSKAYSRLENLKTHLRSHTGE
KPYVCEYPSCTKAFSNASDRAKHQNRTHSNEKPYACKQAGCTKRYTDPSSLRKHVKTVHG
PEAHVTKRMKAEREREGKREPNIKQEPGMDKDKRKGDAGGTKRTCHPLSPGSNPPSNDQN
PPSNMNPRSNQSSCTSGSDVSVTPQNSPHMTSQNNDSGVDVNVGANEGDSDGDIVVDENP
QPDSTSGGVGVQSRHRGTVRASLVPRLVNKKMQNLSIGGNIESYVDIGGYDDQRKLGMHK
AESFTEVSSTTAFPAKQKNATFPRKLPLTPHRQVALLNQDRRDSGTVSDGSRKSSLASQN
SRRSSQNTGGINVAGSYDPISLDSSRRSSSNVTSGSSALNPYQLHRLRSRFNENAGLPPP
TPVDREGYTKSQLSRWLKDDTPIPDRGGYLYNPQQRPSLPQMGPPKPPMEDRRRSEPRSS
ARTPLPPHLGGGVAFRRASDPTRKSPQMDPTRLPNVQRHNSWNSIHPLPGIKPQGCAYPG
AVPCNPSNQPPMQQVQRQRSISNSSNYYGGESGYHSHGSNMALHQPSYQVNEQVLMENFN
NDVINGDVTYNGQVYGKSDHWHQQTTPHPHQTMTPASVGSMPPHQRFPQNGHINQNPFPR
SFNNNPNVGPNKGVQDANATRYYGNPHFNPNAQMGGQVHGHPTMRPQKMTQQNVTQQFGN
PDFMQLPYNAPSPYIAQRQSVQNQGRSPNMINSGNVEMHLGHQNRTANQITPRPPVSSTS
SNQNRMRLQRVRQSGSSSVTSYNQAPSVTSQSNGQAGRTNYTPDAQIPDEFLQQEFIDSI
PELHPETHRENEPNENQPYVKMAADSTTGPDLDGITGNFCYQDDDAMSGTNTDVTLPPMS
AFSSRMATPMMGKYPPQIPTNQHPASNMAINSMSSMLSTLEEENKYLNLLPQ
Nucleotide sequence
Length: 4,659
>Cisavi.CG.ENS81.R2.2928354-2956118.16455.t
ATGGAGACCGCAGGGAAAAACGACATCGACGTGCTGCATCAAAAGTGCGGAAAGGATTTC
TCAAGAGAAGAAAAAGCCACCCCGCAAACTCATTTGCCACCAGATCACAAGATCGAAGGT
TCGGAACACCACTCGCGGAGATCTGAGGCGCCAAAGCCGGGAAAGCAATCGGCGTTTTTT
TCGAGCCAAGACGAGAACGAAGCAAGGGAAGAGGCGGTTGTGTCTTCTTCTACTAGTCCA
AGCGATAAACGGACGAAACGCTCATCTTCTCCCGATCACAACGAGCACTTACGTCAGCAA
AACGATGAGTTACGTCATCAGTCACGTCATCAATCAGTAAGGGAGGCTGCAACCAGCACA
ACGACATTTGAGGATGAATTCGAGAAGCAGTTCCACGGAAACGAGAATCTCGGAGTCACG
AGCAGCGATGGTCGCCCGCCCAGCTGTGGAACTCCACTGGGTAAAATAAAGGAAGAAACC
AGCTCCAACAACAGAAAAGTCATGTTACTAGGCAACGCGCACCAATTTACCAAACCGTCA
CCTAGCAACAGGAATATGACGTCATCACAAGCAGGCAACACCAACTGCAACGGCGAAGAT
CGACGCTACCCCATTGGCAACCCACATACCCAGGTGGATCCCCACTCTAGAGACGGGAGA
TACCCGTTTGAACCTCGGACTATGAACAATGCTCCTGGCTTTAGTGGGAGTCCTATTCAC
TCCGACATCTCCCTTATACCTATGTCGCCCCAGCAGAGCGCCAACCCCTTTAACTATAAC
TCCTCGCTCGAGTTTTACATGGGTGGGCTGTCCCAAGGTGGGCTCAGGTCCCCTACCATG
TCCATCCTGTCCCAAGCTAGAAATTTAAGCCCCCACCATTCGATTCAAGAGCTCGAGAAG
TTATGCTACCCATACTACAACGCCCACCAAAGCAACATGTCGGTCAACGGAGCTCAACAA
AACTCCAATCAGTCGCTTCCTGGAAATTTCTCGCAGAATATCAACCCGCTCGCCTACTAC
CAACTGATGCAGCAGCAACAGCGCCTGCTTGCGGTAGCTGCACGGAACGACCGAAACCTC
GCGCTGTCGCTAGAGAAACAAGAGGATTTCGGGCGATTTCCGAGCCCTCTGTGCAGGTCT
CGAGCCAGGAAGCGACCCCTCTCCATCTCTCCCTGTTTCTCCGACACCGGGCTTGACATC
ACAGCCATGATCCGGACTTCCCCTAACTCGTTACTCCCGTTCGGCGGCCTCACCAACTCG
CGGAGTTCGTCGGTGGCAAGCGGCGGAAGTTACGGACATCTCGCAGCTGGCGGAATCAGT
CCGACGTTCGGCTACCAAACCCCGATGATGACGTCACCGCAGCACTTACACGCTCACCTG
CTATCCCGACAAATGCAGTCGTCGTTTGCCGGTCAACTTATGCCCGGGTTCCCAACAAAT
CAGGGAGCTTTCGACAAACCGAATTCCCGATTCGATCCGAATATCTCCACCCGGAATTAC
CTTCCGCACGTTGGCGCTAGCGCTGCCTCTAACGATATGTGCAATCCCCATCGTGATAAT
AAGAATTTCTCAAAGCATTCCGTTGACCCGCAAAGTCCCAACGTGCAGTTCAACAACAAT
AACAACAACAGCAACTCAATACCAGGTATTTCCCCGGGTGGCCACGGGGCAAACGAGGAG
AACGACGTGGTGTACGACACGAATTGCTCGTGGGTGAATTGCTCACTTGAATTCGACACC
CAAGAGCAACTGGTCCATCACATCAACAACGACCATATTCACGGCGACAAGAAGGAATTC
GTGTGCAGATGGATCGGCTGCGCACGAGACCAGCGACCATTCAAAGCCCAGTACATGTTG
GTAGTTCATATGAGGCGTCACACTGGCGAAAAACCGCACCGCTGTACGTTCGAAGGATGC
TCAAAGGCGTACTCGAGACTGGAGAACTTAAAAACTCACCTTCGCTCGCATACCGGTGAG
AAGCCGTACGTGTGTGAGTACCCGTCTTGCACTAAGGCGTTTAGCAATGCATCGGATCGG
GCGAAGCACCAGAACCGAACTCATTCGAACGAGAAACCGTACGCTTGCAAGCAGGCAGGA
TGCACGAAGCGATACACCGATCCTAGCTCTCTGCGGAAGCACGTCAAGACCGTCCACGGG
CCCGAAGCCCACGTGACCAAGCGCATGAAAGCGGAACGGGAGAGGGAGGGAAAGAGAGAA
CCGAATATCAAACAGGAACCGGGAATGGATAAAGATAAGAGGAAGGGCGATGCTGGAGGG
ACGAAGCGAACTTGTCATCCACTCTCGCCGGGCTCAAACCCGCCATCTAACGACCAAAAC
CCCCCAAGTAACATGAATCCCCGTAGCAACCAGTCGTCCTGCACTTCCGGTTCCGACGTG
TCCGTCACCCCGCAGAACTCGCCTCATATGACGTCACAGAACAACGACTCGGGCGTCGAC
GTGAACGTGGGCGCAAACGAGGGTGACAGCGACGGGGACATAGTGGTGGACGAGAACCCG
CAACCTGATTCGACGTCCGGTGGAGTTGGAGTGCAGAGTCGACACAGGGGGACGGTGCGC
GCCTCTCTGGTGCCTCGCCTGGTAAACAAAAAGATGCAGAACCTATCGATAGGTGGCAAC
ATCGAGTCGTACGTTGACATCGGTGGTTACGATGACCAAAGAAAGTTGGGAATGCACAAG
GCTGAAAGCTTCACAGAAGTCTCGTCCACCACCGCTTTCCCTGCCAAGCAGAAGAACGCC
ACCTTCCCGCGGAAGCTACCTCTAACGCCTCACCGACAGGTGGCGCTGTTGAACCAAGAT
CGCAGGGACAGTGGGACGGTTAGTGACGGGAGCAGAAAATCGTCATTGGCTTCTCAAAAT
AGCCGACGATCGAGCCAGAACACTGGTGGAATAAACGTGGCAGGTTCCTACGACCCGATA
TCTCTCGATTCTTCGCGTCGGTCAAGCTCCAACGTAACCTCGGGTTCGTCCGCCCTCAAC
CCCTACCAGCTCCACCGCTTGAGGTCGCGCTTTAACGAGAACGCGGGACTTCCCCCTCCC
ACCCCGGTAGACAGGGAGGGATACACGAAGAGTCAACTGAGCCGCTGGCTCAAAGATGAC
ACCCCCATTCCTGACCGTGGGGGTTACCTCTACAACCCCCAACAACGACCCTCCTTGCCC
CAGATGGGTCCCCCGAAGCCCCCCATGGAAGACCGTCGGCGGAGCGAGCCGAGGTCGTCA
GCTCGTACTCCGTTACCCCCACATTTAGGGGGCGGTGTAGCGTTCAGGAGAGCCAGTGAC
CCAACACGAAAATCGCCCCAGATGGATCCAACCAGGTTACCCAACGTGCAGCGCCACAAC
AGCTGGAACAGCATTCACCCCTTGCCGGGTATCAAACCGCAAGGGTGCGCTTACCCAGGT
GCCGTGCCGTGTAACCCGTCCAACCAACCGCCCATGCAGCAGGTCCAGCGACAACGTTCT
ATCAGCAACAGCAGCAACTACTACGGTGGCGAAAGCGGTTACCACAGCCACGGGAGCAAC
ATGGCGTTGCACCAACCAAGCTACCAGGTCAACGAGCAAGTGCTCATGGAGAATTTCAAC
AATGACGTAATCAACGGTGACGTCACGTATAACGGACAGGTGTACGGTAAGAGCGACCAC
TGGCACCAGCAGACTACACCCCACCCACATCAAACCATGACCCCTGCGTCGGTGGGTTCG
ATGCCCCCTCACCAACGATTCCCCCAGAACGGTCATATCAACCAGAACCCCTTTCCACGA
TCTTTTAATAACAACCCCAACGTGGGACCGAACAAGGGGGTCCAGGACGCAAACGCTACC
CGGTATTACGGGAATCCCCACTTTAACCCCAACGCGCAAATGGGCGGACAAGTGCACGGT
CATCCCACGATGAGGCCGCAGAAAATGACGCAGCAGAACGTGACTCAGCAGTTCGGGAAC
CCGGACTTTATGCAGCTCCCCTACAACGCGCCGTCGCCCTACATCGCACAGCGACAGAGC
GTGCAAAACCAAGGGAGATCCCCTAACATGATCAACTCAGGGAACGTGGAAATGCATCTG
GGTCACCAAAACCGGACAGCCAATCAAATCACGCCACGTCCGCCGGTTAGTTCGACGTCG
TCCAATCAGAACCGAATGCGTCTCCAGCGCGTGCGCCAAAGTGGCTCGAGCAGTGTGACG
TCATACAACCAGGCGCCGTCTGTGACGTCACAAAGCAATGGGCAAGCCGGGAGGACGAAC
TATACACCCGATGCGCAGATTCCCGACGAGTTTTTGCAGCAAGAGTTCATTGACAGCATT
CCAGAACTGCATCCCGAAACTCACAGAGAAAACGAACCAAACGAAAACCAACCTTACGTG
AAAATGGCTGCAGACAGCACGACTGGTCCTGACTTGGATGGAATCACTGGTAATTTCTGC
TATCAGGATGATGACGCAATGAGCGGAACGAACACGGATGTCACACTTCCGCCAATGTCC
GCATTTTCCTCTCGCATGGCCACGCCCATGATGGGAAAGTACCCGCCCCAAATCCCAACC
AATCAGCACCCAGCATCAAACATGGCGATAAACAGTATGAGTTCCATGCTTTCCACGCTT
GAAGAAGAAAACAAATATTTAAACCTTCTTCCCCAGTGA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[567-596] 3.14E-7 - T[614-673] 2.5E-17 - T[661-716] 8.92E-9 |
| SMART |
Znf_C2H2_type (IPR013087) - T[567-592] 1.3 - T[600-627] 3.7 - T[633-657] 0.0027 - T[663-688] 0.12 - T[694-719] 7.1E-4 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[569-592] . - T[635-657] . - T[665-688] . - T[696-719] . |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[605-632] 10.18 - T[633-662] 14.627 - T[663-693] 13.775 - T[694-724] 10.575 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLI1_HUMAN | 45.436 % | 358 | 9.89E-104 |
| GLI2_HUMAN | 36.624 % | 419 | 3.94E-122 |
| GLI3_HUMAN | 40.03 % | 393 | 3.28E-113 |